Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
FOXP3Q9BZS1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
FOXP3Q9BZS1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.6□□□□□ -1.83
FOXP3Q9BZS1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
FOXP3Q9BZS1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.6□□□□□ -1.83
FOXP3Q9BZS1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.6□□□□□ -1.83
FOXP3Q9BZS1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 AC093010.3-201ENST00000570269 15214 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 AL513302.2-201ENST00000562313 1842 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 RNU6-704P-201ENST00000364162 103 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 Y_RNA.262-201ENST00000364641 102 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 RNU6-804P-201ENST00000384286 107 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 Y_RNA.498-201ENST00000384460 102 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 SNORA1.3-201ENST00000384676 136 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 SNORA48.8-201ENST00000391324 134 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 AL161651.1-201ENST00000440882 223 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 AL121594.1-201ENST00000475906 575 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 RNU1-61P-201ENST00000516107 151 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 RNU6-1219P-201ENST00000516143 112 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 RNU6-191P-201ENST00000516295 94 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 MTND5P41-201ENST00000517498 206 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 AC073476.4-201ENST00000628409 72 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 SNORD98-201ENST00000636377 67 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 AC073346.2-201ENST00000624724 2058 ntBASIC3.59□□□□□ -1.83
FOXP3Q9BZS1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.59□□□□□ -1.84
FOXP3Q9BZS1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 AC110774.1-201ENST00000623567 2018 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 RNA5SP383-201ENST00000362934 120 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 RNU4-80P-201ENST00000363200 141 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 MIR490-201ENST00000384865 128 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 AL512633.1-201ENST00000399931 655 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 RNA5SP293-201ENST00000410527 113 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 RNU6-1199P-201ENST00000411249 104 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 AC245291.1-201ENST00000419501 328 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 HMGN1P18-201ENST00000457642 277 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 RNU6-346P-201ENST00000516288 111 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 MIR5692C2-201ENST00000577959 77 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 HSPE1P7-201ENST00000604681 321 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 AC108706.1-201ENST00000611053 297 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 AC004467.1-201ENST00000615678 330 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 AC068831.7-201ENST00000616954 363 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 AC091932.3-201ENST00000624223 323 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 AC092593.1-201ENST00000515413 1815 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.58□□□□□ -1.84
FOXP3Q9BZS1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 RNU1-62P-201ENST00000362599 164 ntBASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 RNU6-653P-201ENST00000363074 106 ntBASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 RNU6-211P-201ENST00000384047 107 ntBASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 RNU6-1310P-201ENST00000384153 107 ntBASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 MIR549A-201ENST00000385268 96 ntBASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 U3.26-201ENST00000391236 204 ntBASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 RNU6-1135P-201ENST00000411083 103 ntBASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 MTATP6P29-201ENST00000415057 132 ntBASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 IFNA11P-201ENST00000446352 526 ntBASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 AIG1P1-201ENST00000503376 148 ntBASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 AC004944.1-201ENST00000517807 3059 ntBASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 AC004832.4-201ENST00000608952 331 ntBASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 AL365265.1-201ENST00000621045 234 ntBASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 snoU18.1-201ENST00000629629 71 ntBASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.57□□□□□ -1.84
FOXP3Q9BZS1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 RNU4-56P-201ENST00000364700 142 ntBASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 Y_RNA.441-201ENST00000384123 112 ntBASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 MIR208B-201ENST00000401172 77 ntBASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 RNU2-54P-201ENST00000410299 190 ntBASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 AC023141.4-201ENST00000412031 328 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms