Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC080078.3-201ENST00000605407 463 ntBASIC3.06□□□□□ -1.92
RTFDC1Q9BY42 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.06□□□□□ -1.92
RTFDC1Q9BY42 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.06□□□□□ -1.92
RTFDC1Q9BY42 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 SNORA38-201ENST00000363946 132 ntBASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 RNU6-1274P-201ENST00000384557 107 ntBASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 SNORA12.2-201ENST00000391040 156 ntBASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 RNU6-1093P-201ENST00000391194 107 ntBASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 MIR1294-201ENST00000408503 142 ntBASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 AF228730.4-201ENST00000421457 183 ntBASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 AL353997.1-201ENST00000432936 108 ntBASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 AC090515.1-201ENST00000465295 476 ntBASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 AC234781.5-201ENST00000508429 271 ntBASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 RNU6-976P-201ENST00000516086 111 ntBASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 HSPE1P20-201ENST00000538133 289 ntBASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 AC004584.2-201ENST00000570407 410 ntBASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.05□□□□□ -1.92
RTFDC1Q9BY42 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 SNORD115-8-201ENST00000363856 82 ntBASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 SNORD115-38-201ENST00000365037 82 ntBASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 RNU6-17P-201ENST00000384245 107 ntBASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 RNU6-18P-201ENST00000384527 107 ntBASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 RNU6-541P-201ENST00000384709 110 ntBASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 MIR32-201ENST00000384965 70 ntBASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 MIR625-201ENST00000385047 85 ntBASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 Y_RNA.597-201ENST00000410463 100 ntBASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 MIR1273D-201ENST00000577266 86 ntBASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 SNRPGP20-201ENST00000604477 205 ntBASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 AL050343.2-201ENST00000607338 280 ntBASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.04□□□□□ -1.92
RTFDC1Q9BY42 Y_RNA.48-201ENST00000362710 103 ntBASIC3.03□□□□□ -1.92
RTFDC1Q9BY42 RNA5SP125-201ENST00000364843 120 ntBASIC3.03□□□□□ -1.92
RTFDC1Q9BY42 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RTFDC1Q9BY42 RNU6-1304P-201ENST00000411374 106 ntBASIC3.03□□□□□ -1.92
RTFDC1Q9BY42 AC007064.1-201ENST00000412238 351 ntBASIC3.03□□□□□ -1.92
RTFDC1Q9BY42 DPH3P2-201ENST00000422618 250 ntBASIC3.03□□□□□ -1.92
RTFDC1Q9BY42 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.03□□□□□ -1.92
RTFDC1Q9BY42 snoU13.6-201ENST00000458785 104 ntBASIC3.03□□□□□ -1.92
RTFDC1Q9BY42 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.03□□□□□ -1.92
RTFDC1Q9BY42 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.03□□□□□ -1.92
RTFDC1Q9BY42 AC103810.6-201ENST00000606708 136 ntBASIC3.03□□□□□ -1.92
RTFDC1Q9BY42 AC107871.2-201ENST00000612894 502 ntBASIC3.03□□□□□ -1.92
RTFDC1Q9BY42 AC090971.5-201ENST00000621102 293 ntBASIC3.03□□□□□ -1.92
RTFDC1Q9BY42 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RTFDC1Q9BY42 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 VTRNA1-1-201ENST00000363120 99 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 RNA5SP456-201ENST00000364002 114 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 SNORD114-30-201ENST00000364448 72 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 SNORD32B-201ENST00000364460 84 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 Y_RNA.319-201ENST00000365138 92 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 Y_RNA.405-201ENST00000383979 100 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 RNU6-546P-201ENST00000383991 107 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 Y_RNA.451-201ENST00000384200 100 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 Y_RNA.524-201ENST00000384564 100 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 Y_RNA.561-201ENST00000384694 100 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 UBE2V1P7-201ENST00000446395 340 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 GSTA11P-201ENST00000452866 669 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 AC007215.1-201ENST00000464893 276 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 RNA5SP76-201ENST00000516277 87 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 HSPE1P18-201ENST00000517602 280 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 AC023442.1-201ENST00000531247 422 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 AC010928.2-201ENST00000588017 287 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 AL359314.1-201ENST00000616913 261 ntBASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
RTFDC1Q9BY42 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 RNU6-280P-201ENST00000364145 104 ntBASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 RNU6-245P-201ENST00000384020 107 ntBASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 RNU6-1032P-201ENST00000384100 107 ntBASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 RNU6-378P-201ENST00000384324 107 ntBASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 Y_RNA.579-201ENST00000390939 94 ntBASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 MIR190B-201ENST00000401119 79 ntBASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 AL079342.1-201ENST00000401460 267 ntBASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 MIR1289-2-201ENST00000408360 111 ntBASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 RPS12P2-201ENST00000439728 269 ntBASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 AC144568.1-201ENST00000520139 137 ntBASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 AC022616.8-201ENST00000533569 253 ntBASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 MIR6733-201ENST00000635723 61 ntBASIC3.01□□□□□ -1.93
RTFDC1Q9BY42 AP006437.1-201ENST00000641440 3685 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms