Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.42□□□□□ -1.86
SSBP4Q9BWG4 FAM35DP-201ENST00000323387 2712 ntBASIC3.42□□□□□ -1.86
SSBP4Q9BWG4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 RNU1-15P-201ENST00000353977 144 ntBASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 RNY1P10-201ENST00000363268 113 ntBASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 SNORA74A-201ENST00000364089 198 ntBASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 SNORD6-201ENST00000365444 73 ntBASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 RNU1-57P-201ENST00000384491 166 ntBASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 MIR607-201ENST00000385241 96 ntBASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 AC063976.3-201ENST00000426849 329 ntBASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 AC093663.1-201ENST00000497190 394 ntBASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 MIR6862-1-201ENST00000613016 70 ntBASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 MIR6862-2-201ENST00000614755 70 ntBASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 AC006435.5-201ENST00000624486 112 ntBASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSBP4Q9BWG4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.4□□□□□ -1.86
SSBP4Q9BWG4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 MIR423-201ENST00000362201 94 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 Y_RNA.107-201ENST00000363190 121 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 SNORA63D-201ENST00000364359 132 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 Y_RNA.342-201ENST00000365352 113 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 RNU6-117P-201ENST00000365415 107 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 AL117342.1-201ENST00000404861 406 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 HMGN2P7-201ENST00000456186 273 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 RN7SL481P-201ENST00000477764 299 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 RPL7AP6-201ENST00000477943 801 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 RPS27P22-201ENST00000478056 241 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 AC078918.1-201ENST00000498515 228 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 RNU6-904P-201ENST00000516206 101 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 IGKV3D-34-201ENST00000522638 302 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 AC084364.2-201ENST00000546924 395 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 AL360157.1-201ENST00000565962 87 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 AC022655.2-201ENST00000577280 318 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 FAM27D1-201ENST00000612308 341 ntBASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSBP4Q9BWG4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 RN7SKP160-201ENST00000363804 340 ntBASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 RNU1-63P-201ENST00000383902 164 ntBASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 RNU1-82P-201ENST00000390851 165 ntBASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 U3.30-201ENST00000391308 210 ntBASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 RNU7-14P-201ENST00000459331 62 ntBASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 AC092490.3-201ENST00000545370 572 ntBASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 AC074050.1-201ENST00000563247 211 ntBASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 RN7SL753P-201ENST00000581238 290 ntBASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
SSBP4Q9BWG4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 RNA5SP435-201ENST00000364044 108 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 RNA5SP242-201ENST00000364171 118 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 SNORD32B-201ENST00000364460 84 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 RNU6-975P-201ENST00000384296 105 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 MIR1286-201ENST00000408112 78 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 MIR1255A-201ENST00000408338 113 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 AC023141.4-201ENST00000412031 328 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 RPS4XP11-201ENST00000446897 772 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 AL162151.2-201ENST00000448875 158 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 AC112771.1-201ENST00000463581 102 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 AC072052.1-201ENST00000496556 306 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 AC140172.1-201ENST00000502928 141 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 RNA5SP362-201ENST00000516048 118 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 RNU6-240P-201ENST00000516098 97 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 IGKV2-18-201ENST00000522607 343 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 AC011604.1-201ENST00000545978 196 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 MIR6729-201ENST00000618194 65 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 U6.73-201ENST00000619194 103 ntBASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSBP4Q9BWG4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SSBP4Q9BWG4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms