Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.76□□□□□ -2.29
UPK3BQ9BT76 MTND2P32-201ENST00000521584 1038 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.76□□□□□ -2.29
UPK3BQ9BT76 MIR4703-201ENST00000577728 79 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.76□□□□□ -2.29
UPK3BQ9BT76 AC090616.2-202ENST00000584248 222 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 NIFKP6-201ENST00000598115 845 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 CTHRC1P1-201ENST00000605383 469 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 AC103810.9-201ENST00000606688 112 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 AL365434.2-201ENST00000607979 234 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.76□□□□□ -2.29
UPK3BQ9BT76 AC006566.1-201ENST00000608943 513 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 MIR6504-201ENST00000613520 61 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 AC040896.1-201ENST00000613819 479 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 AC068787.1-201ENST00000623908 691 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 BX322639.1-202ENST00000423987 2213 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 RNU6-266P-201ENST00000364225 107 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 RNU6-1187P-201ENST00000364771 110 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 SNORA18.2-201ENST00000383865 132 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 RNU6-1127P-201ENST00000384580 107 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 MIR513A1-201ENST00000385138 129 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 SNORA16.2-201ENST00000390991 127 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 RNA5SP247-201ENST00000411181 105 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 MTND3P17-201ENST00000416968 344 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.75□□□□□ -2.29
UPK3BQ9BT76 USP9YP14-201ENST00000430663 563 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 RPL31P35-201ENST00000431058 377 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.75□□□□□ -2.29
UPK3BQ9BT76 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.75□□□□□ -2.29
UPK3BQ9BT76 SCARNA18-201ENST00000459004 134 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 GMFBP1-201ENST00000467831 427 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 COX6CP14-201ENST00000469580 174 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 RNU6-948P-201ENST00000516374 107 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 RN7SKP88-201ENST00000516847 250 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 RNA5SP404-201ENST00000517118 132 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 AC106038.2-201ENST00000520706 568 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 MIR4753-201ENST00000585119 83 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.75□□□□□ -2.29
UPK3BQ9BT76 AL353149.1-201ENST00000610667 244 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 7SK.8-201ENST00000612110 250 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.75□□□□□ -2.29
UPK3BQ9BT76 AP001506.1-201ENST00000615444 211 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 7SK.11-201ENST00000615477 250 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 7SK.13-201ENST00000622040 250 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 AL603839.4-201ENST00000624658 1005 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 AL359697.1-201ENST00000624879 587 ntBASIC0.75□□□□□ -2.29
UPK3BQ9BT76 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
UPK3BQ9BT76 Y_RNA.226-201ENST00000364337 114 ntBASIC0.74□□□□□ -2.29
UPK3BQ9BT76 SNORA72.2-201ENST00000365028 127 ntBASIC0.74□□□□□ -2.29
UPK3BQ9BT76 RNA5SP259-201ENST00000365541 109 ntBASIC0.74□□□□□ -2.29
UPK3BQ9BT76 RNU6-1080P-201ENST00000383982 107 ntBASIC0.74□□□□□ -2.29
UPK3BQ9BT76 RNU6-968P-201ENST00000384076 107 ntBASIC0.74□□□□□ -2.29
UPK3BQ9BT76 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
UPK3BQ9BT76 RNU6-1106P-201ENST00000390845 107 ntBASIC0.74□□□□□ -2.29
UPK3BQ9BT76 SNORA40.3-201ENST00000390964 122 ntBASIC0.74□□□□□ -2.29
UPK3BQ9BT76 MIR1283-1-201ENST00000408494 87 ntBASIC0.74□□□□□ -2.29
UPK3BQ9BT76 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.74□□□□□ -2.29
UPK3BQ9BT76 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.74□□□□□ -2.29
UPK3BQ9BT76 C1DP4-201ENST00000455429 424 ntBASIC0.74□□□□□ -2.29
UPK3BQ9BT76 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.74□□□□□ -2.29
UPK3BQ9BT76 AC093852.1-201ENST00000503587 266 ntBASIC0.74□□□□□ -2.29
UPK3BQ9BT76 AC010486.2-201ENST00000505572 483 ntBASIC0.74□□□□□ -2.29
UPK3BQ9BT76 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.74□□□□□ -2.29
UPK3BQ9BT76 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.74□□□□□ -2.29
UPK3BQ9BT76 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.74□□□□□ -2.29
UPK3BQ9BT76 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.74□□□□□ -2.29
UPK3BQ9BT76 AC011458.1-201ENST00000604034 617 ntBASIC0.74□□□□□ -2.29
UPK3BQ9BT76 SNORA43.4-201ENST00000629559 138 ntBASIC0.74□□□□□ -2.29
UPK3BQ9BT76 MIR338-201ENST00000636369 67 ntBASIC0.74□□□□□ -2.29
UPK3BQ9BT76 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.74□□□□□ -2.29
UPK3BQ9BT76 SNORA4.2-201ENST00000365313 147 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 MIR222-201ENST00000384992 110 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 HMGN1P14-201ENST00000412459 517 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.73□□□□□ -2.29
UPK3BQ9BT76 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.73□□□□□ -2.29
UPK3BQ9BT76 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.73□□□□□ -2.29
UPK3BQ9BT76 HSPE1P13-201ENST00000451143 297 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.73□□□□□ -2.29
UPK3BQ9BT76 RNU7-34P-201ENST00000459394 64 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.73□□□□□ -2.29
UPK3BQ9BT76 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 AL442163.3-201ENST00000554110 156 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 MTCO3P23-201ENST00000561363 289 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 AGGF1P4-201ENST00000568249 801 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 MIR3664-201ENST00000579074 99 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.73□□□□□ -2.29
UPK3BQ9BT76 AC245884.10-201ENST00000597355 337 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 AC245014.2-201ENST00000603689 287 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 AC246785.4-201ENST00000605374 287 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 AC080078.3-201ENST00000605407 463 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 RNU6-85P-201ENST00000605989 107 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.73□□□□□ -2.29
UPK3BQ9BT76 AL133216.2-202ENST00000634512 349 ntBASIC0.73□□□□□ -2.29
UPK3BQ9BT76 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.73□□□□□ -2.29
UPK3BQ9BT76 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
UPK3BQ9BT76 AC009541.1-201ENST00000438279 2662 ntBASIC0.72□□□□□ -2.29
UPK3BQ9BT76 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.72□□□□□ -2.29
UPK3BQ9BT76 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
UPK3BQ9BT76 Y_RNA.399-201ENST00000383955 105 ntBASIC0.72□□□□□ -2.29
UPK3BQ9BT76 SNORA29-201ENST00000384183 140 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms