Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.42□□□□□ -2.18
HDHD3Q9BSH5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.42□□□□□ -2.18
HDHD3Q9BSH5 AC010928.2-201ENST00000588017 287 ntBASIC1.42□□□□□ -2.18
HDHD3Q9BSH5 AP000654.2-201ENST00000605633 586 ntBASIC1.42□□□□□ -2.18
HDHD3Q9BSH5 MIR3976-201ENST00000606807 139 ntBASIC1.42□□□□□ -2.18
HDHD3Q9BSH5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.42□□□□□ -2.18
HDHD3Q9BSH5 MIR3662-201ENST00000637030 95 ntBASIC1.42□□□□□ -2.18
HDHD3Q9BSH5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HDHD3Q9BSH5 ZNF702P-202ENST00000434269 1966 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 RNU6-877P-201ENST00000383868 107 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 Y_RNA.453-201ENST00000384223 109 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 U8.10-201ENST00000384260 133 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 RNA5SP465-201ENST00000391195 109 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 Y_RNA.599-201ENST00000410489 109 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AC004866.1-201ENST00000411748 78 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 EIF1P1-201ENST00000421436 341 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 FTH1P25-201ENST00000447665 469 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AC016925.1-201ENST00000458303 298 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AC007215.1-201ENST00000464893 276 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 UBE2DNL-203ENST00000474922 222 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AC092989.1-201ENST00000481235 277 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AC114801.2-201ENST00000503825 781 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AC091544.4-201ENST00000555268 342 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AC022254.1-201ENST00000567857 235 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 MIR4299-201ENST00000577899 72 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 MIR4648-201ENST00000580107 72 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AP000907.4-201ENST00000604143 237 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AC009318.2-201ENST00000610917 651 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 MIR8081-201ENST00000611533 95 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AC084768.2-201ENST00000622736 221 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AC098679.4-201ENST00000624241 654 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AC008555.8-201ENST00000623602 2168 ntBASIC1.41□□□□□ -2.18
HDHD3Q9BSH5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
HDHD3Q9BSH5 RNA5SP276-201ENST00000362580 94 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 RNU6-562P-201ENST00000362731 107 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 U8.2-201ENST00000363156 134 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 RNA5SP493-201ENST00000364115 91 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 RNU4-56P-201ENST00000364700 142 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 Y_RNA.573-201ENST00000384763 105 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 MIR597-201ENST00000384968 97 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 MIR208B-201ENST00000401172 77 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 FCF1P9-201ENST00000412546 282 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 RPL30P16-201ENST00000419341 429 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 AC123900.1-201ENST00000420390 96 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 MTCO1P44-201ENST00000441935 243 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 RNU1-131P-201ENST00000458943 161 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 RPL23AP75-201ENST00000491601 451 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 RNA5SP490-201ENST00000517141 136 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 AP003465.2-201ENST00000602571 373 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 AC016727.2-201ENST00000603988 621 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 AC005034.5-201ENST00000604219 466 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 AC005296.1-201ENST00000616145 209 ntBASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.4□□□□□ -2.19
HDHD3Q9BSH5 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 SNORD115-3-201ENST00000363100 82 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 SNORA32.2-201ENST00000384049 122 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 SNORA8-201ENST00000384574 139 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 MIR487A-201ENST00000385009 80 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AL357139.1-201ENST00000407792 426 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AL158823.1-201ENST00000418441 478 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AL358453.1-201ENST00000422522 250 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AL035666.1-201ENST00000446195 348 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 NFU1P2-201ENST00000448700 469 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 MTND1P17-201ENST00000448961 204 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AL513124.1-201ENST00000450410 614 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AC130509.1-201ENST00000464158 433 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 RPS29P21-201ENST00000496272 170 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 MTCO2P30-201ENST00000503662 364 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AC010486.1-201ENST00000511793 424 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 MIR5696-201ENST00000578474 85 ntBASIC1.39□□□□□ -2.19
HDHD3Q9BSH5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms