Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
FOXC2Q99958 MTND4P23-201ENST00000447723 1363 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 RNU1-42P-201ENST00000364033 160 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 SNORD32B-201ENST00000364460 84 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 RNU6-692P-201ENST00000384496 107 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 RNU6-160P-201ENST00000384591 107 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
FOXC2Q99958 SNORA67.6-201ENST00000391093 99 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 RNA5SP100-201ENST00000410903 110 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 RNA5SP59-201ENST00000410922 110 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 RNU6-1068P-201ENST00000410958 103 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 RNU6-1245P-201ENST00000411130 106 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.4□□□□□ -2.19
FOXC2Q99958 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.4□□□□□ -2.19
FOXC2Q99958 RPL23AP95-201ENST00000426806 265 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.4□□□□□ -2.19
FOXC2Q99958 RNU6-1208P-201ENST00000459588 107 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 AC027575.1-201ENST00000481064 460 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 AC091435.1-201ENST00000505442 584 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.4□□□□□ -2.19
FOXC2Q99958 RNU6-189P-201ENST00000516120 101 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 RNVU1-2-201ENST00000516326 135 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.4□□□□□ -2.19
FOXC2Q99958 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.4□□□□□ -2.19
FOXC2Q99958 TRAV32-201ENST00000553993 340 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 AC245505.1-201ENST00000556398 224 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 MIR4285-201ENST00000581001 85 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 RNU6-85P-201ENST00000605989 107 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 RNU6-89P-201ENST00000606519 100 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
FOXC2Q99958 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 AC097372.5-201ENST00000623665 376 ntBASIC1.4□□□□□ -2.19
FOXC2Q99958 Y_RNA.3-201ENST00000362331 103 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 RNU4-15P-201ENST00000362613 141 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 RNU6-451P-201ENST00000362921 107 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 RNU6-23P-201ENST00000363283 107 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 RNU6-827P-201ENST00000365553 106 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 Y_RNA.372-201ENST00000365599 102 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 MIR181A1-201ENST00000385026 110 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 MIR30A-201ENST00000385092 71 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
FOXC2Q99958 RNA5SP219-201ENST00000390940 113 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 SNORA26.3-201ENST00000391119 136 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 RNU6-293P-201ENST00000411259 106 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 MTCO1P20-201ENST00000425366 358 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 AL121601.2-201ENST00000438019 707 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 MTCO2P3-201ENST00000442543 421 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 RPS4XP11-201ENST00000446897 772 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 HMGN2P18-201ENST00000450680 270 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 RNU7-138P-201ENST00000459479 64 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 Y_RNA.654-201ENST00000497848 106 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.39□□□□□ -2.19
FOXC2Q99958 Y_RNA.655-201ENST00000515919 96 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 RNU6-1038P-201ENST00000516516 104 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 Y_RNA.704-201ENST00000516851 102 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 SNORD60.2-201ENST00000516883 86 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 AC069113.1-201ENST00000517763 267 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 AP005597.4-201ENST00000526762 229 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 AC024614.2-201ENST00000577584 372 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 MIR3169-201ENST00000578032 83 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.39□□□□□ -2.19
FOXC2Q99958 MIR5692C1-201ENST00000585309 91 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 AL645939.4-201ENST00000604495 135 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 AL356157.2-201ENST00000605122 111 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.39□□□□□ -2.19
FOXC2Q99958 AC130454.1-201ENST00000622948 401 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.39□□□□□ -2.19
FOXC2Q99958 FER-210ENST00000628534 558 ntTSL 5 BASIC1.39□□□□□ -2.19
FOXC2Q99958 AL450472.1-202ENST00000637286 180 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 AC068137.4-201ENST00000638485 296 ntBASIC1.39□□□□□ -2.19
FOXC2Q99958 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.39□□□□□ -2.19
FOXC2Q99958 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
FOXC2Q99958 ZNF209P-201ENST00000593450 2304 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 Y_RNA.38-201ENST00000362617 102 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 SNORD114-26-201ENST00000363543 72 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 RNY3P3-201ENST00000363816 102 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 Y_RNA.231-201ENST00000364358 102 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 SNORD114-6-201ENST00000364393 72 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 RNU6-1141P-201ENST00000364520 107 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 RNU4-42P-201ENST00000364738 142 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.38□□□□□ -2.19
FOXC2Q99958 RNU6-142P-201ENST00000384019 107 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 RNU6-43P-201ENST00000384302 107 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 Y_RNA.554-201ENST00000384672 102 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 AL357139.1-201ENST00000407792 426 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 RN7SKP61-201ENST00000410642 295 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 AL513185.2-201ENST00000425543 193 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 AL133396.1-201ENST00000432048 687 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 AC112492.4-201ENST00000456549 352 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 RNU6-1281P-201ENST00000516223 105 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.38□□□□□ -2.19
FOXC2Q99958 AC016957.1-201ENST00000534895 309 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.38□□□□□ -2.19
FOXC2Q99958 AL161670.1-201ENST00000554348 137 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 AC103996.1-201ENST00000555468 102 ntBASIC1.38□□□□□ -2.19
FOXC2Q99958 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.38□□□□□ -2.19
FOXC2Q99958 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms