Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.42□□□□□ -2.18
CDX2Q99626 AC013470.1-201ENST00000453438 462 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.42□□□□□ -2.18
CDX2Q99626 RPS29P15-201ENST00000458329 171 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 MTCO3P38-201ENST00000468910 766 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 MTCYBP18-201ENST00000501056 747 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.42□□□□□ -2.18
CDX2Q99626 AC114801.2-201ENST00000503825 781 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
CDX2Q99626 RNU6-835P-201ENST00000516974 104 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.42□□□□□ -2.18
CDX2Q99626 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.42□□□□□ -2.18
CDX2Q99626 AC022254.1-201ENST00000567857 235 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.42□□□□□ -2.18
CDX2Q99626 RMST_3.1-201ENST00000611651 109 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CDX2Q99626 AC008133.2-201ENST00000624540 351 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 AC024614.3-201ENST00000637860 256 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 ICE2P2-201ENST00000483823 2787 ntBASIC1.42□□□□□ -2.18
CDX2Q99626 RNU6-1164P-201ENST00000364428 107 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 RNU6-1303P-201ENST00000364841 107 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 RNU5E-7P-201ENST00000365290 117 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 RNU4-20P-201ENST00000365601 151 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.41□□□□□ -2.18
CDX2Q99626 RNU6-116P-201ENST00000384042 109 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 RNU6-1042P-201ENST00000384204 107 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 MIR1277-201ENST00000408536 78 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 RNU6-908P-201ENST00000410160 94 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 MTATP6P18-201ENST00000417994 673 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 EIF1P1-201ENST00000421436 341 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 MTCO1P20-201ENST00000425366 358 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 MTND1P2-201ENST00000430604 821 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 RPS15AP10-201ENST00000432472 382 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 IFNA20P-201ENST00000436840 528 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 MTATP6P23-201ENST00000440153 476 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 PRELID3BP1-201ENST00000457142 540 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 RNU6-1132P-201ENST00000459214 107 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 RNU6-261P-201ENST00000459506 102 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 RPS29P25-201ENST00000481709 171 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 HMGB1P29-201ENST00000505659 499 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.41□□□□□ -2.18
CDX2Q99626 AC074344.1-201ENST00000512823 224 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 RNA5SP401-201ENST00000515920 127 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 RNU6-507P-201ENST00000516045 100 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 Y_RNA.675-201ENST00000516389 149 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 RNU6-1038P-201ENST00000516516 104 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.41□□□□□ -2.18
CDX2Q99626 MTND1P35-201ENST00000526739 508 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 AP001893.2-201ENST00000526949 202 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 AP005435.4-201ENST00000529514 284 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 AC104383.1-201ENST00000530297 370 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 AL512360.1-201ENST00000555346 234 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.41□□□□□ -2.18
CDX2Q99626 AC026271.5-201ENST00000577873 130 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 MIR4801-201ENST00000582704 82 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 AC245014.2-201ENST00000603689 287 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 AC246785.4-201ENST00000605374 287 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 AC017083.3-201ENST00000609955 700 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 AC109347.2-201ENST00000610220 349 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 AL355073.2-201ENST00000612106 557 ntBASIC1.41□□□□□ -2.18
CDX2Q99626 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.41□□□□□ -2.18
CDX2Q99626 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.41□□□□□ -2.18
CDX2Q99626 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CDX2Q99626 Y_RNA.89-201ENST00000363031 102 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 RNU6-534P-201ENST00000364877 106 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 RNU6-546P-201ENST00000383991 107 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 RNU6-1029P-201ENST00000384109 107 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 SNORA8-201ENST00000384574 139 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 MIR29B2-201ENST00000385055 81 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 RNU4-46P-201ENST00000410818 138 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.4□□□□□ -2.19
CDX2Q99626 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.4□□□□□ -2.19
CDX2Q99626 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.4□□□□□ -2.19
CDX2Q99626 MTND4P18-201ENST00000447010 465 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.4□□□□□ -2.19
CDX2Q99626 AC022364.2-201ENST00000457963 554 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 RNU7-182P-201ENST00000459009 62 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 AC116353.2-201ENST00000505332 712 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 CCDC34P1-201ENST00000507441 517 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 Y_RNA.693-201ENST00000516641 110 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 RNU6-113P-201ENST00000516653 101 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.4□□□□□ -2.19
CDX2Q99626 HIF1AP1-201ENST00000553642 175 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 AL118558.2-201ENST00000556294 238 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 HMGB1P33-201ENST00000563485 527 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 MIR4703-201ENST00000577728 79 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.4□□□□□ -2.19
CDX2Q99626 AL354950.2-201ENST00000617939 290 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 AC007792.1-201ENST00000623023 402 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 AC009161.2-201ENST00000624626 138 ntBASIC1.4□□□□□ -2.19
CDX2Q99626 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
CDX2Q99626 RNU6-212P-201ENST00000362642 104 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 RNU6-451P-201ENST00000362921 107 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 RNY4P14-201ENST00000363656 96 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 Y_RNA.324-201ENST00000365165 102 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 RNU4-48P-201ENST00000365559 182 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 SNORA18.2-201ENST00000383865 132 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 SNORA69-201ENST00000383895 132 ntBASIC1.39□□□□□ -2.19
CDX2Q99626 RNU6-1222P-201ENST00000384615 107 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms