Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RNU2-32P-201ENST00000411193 191 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 EIF1AXP1-201ENST00000419267 435 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 AL139396.1-201ENST00000421137 167 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.08□□□□□ -2.08
CDCA3Q99618 WARS2P1-201ENST00000429678 537 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 AC009238.1-201ENST00000442165 424 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.08□□□□□ -2.08
CDCA3Q99618 AC009237.6-201ENST00000446969 424 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 MTND1P17-201ENST00000448961 204 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.08□□□□□ -2.08
CDCA3Q99618 AC068781.1-201ENST00000488231 618 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 AC090255.1-201ENST00000495779 349 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.08□□□□□ -2.08
CDCA3Q99618 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.08□□□□□ -2.08
CDCA3Q99618 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.08□□□□□ -2.08
CDCA3Q99618 RNU6-965P-201ENST00000516721 96 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 AC005668.1-201ENST00000571142 476 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 MIR3683-201ENST00000580847 82 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 Z98751.3-201ENST00000604447 521 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 U4atac.1-201ENST00000618345 95 ntBASIC2.08□□□□□ -2.08
CDCA3Q99618 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CDCA3Q99618 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDCA3Q99618 RNU6-546P-201ENST00000383991 107 ntBASIC2.07□□□□□ -2.08
CDCA3Q99618 SNORA29-201ENST00000384183 140 ntBASIC2.07□□□□□ -2.08
CDCA3Q99618 SNORA26.3-201ENST00000391119 136 ntBASIC2.07□□□□□ -2.08
CDCA3Q99618 AC012306.1-201ENST00000423267 114 ntBASIC2.07□□□□□ -2.08
CDCA3Q99618 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.07□□□□□ -2.08
CDCA3Q99618 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.07□□□□□ -2.08
CDCA3Q99618 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.07□□□□□ -2.08
CDCA3Q99618 MTND5P5-201ENST00000503764 376 ntBASIC2.07□□□□□ -2.08
CDCA3Q99618 AC021146.2-201ENST00000504736 556 ntBASIC2.07□□□□□ -2.08
CDCA3Q99618 ACA59.1-201ENST00000515966 143 ntBASIC2.07□□□□□ -2.08
CDCA3Q99618 SNORA20.3-201ENST00000516880 132 ntBASIC2.07□□□□□ -2.08
CDCA3Q99618 RNU1-54P-201ENST00000517181 120 ntBASIC2.07□□□□□ -2.08
CDCA3Q99618 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CDCA3Q99618 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.07□□□□□ -2.08
CDCA3Q99618 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.07□□□□□ -2.08
CDCA3Q99618 FGF7P1-201ENST00000582820 288 ntBASIC2.07□□□□□ -2.08
CDCA3Q99618 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.07□□□□□ -2.08
CDCA3Q99618 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.07□□□□□ -2.08
CDCA3Q99618 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.06□□□□□ -2.08
CDCA3Q99618 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
CDCA3Q99618 MIRLET7G-201ENST00000362280 84 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 SNORA25B-201ENST00000365507 128 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 RNU6-968P-201ENST00000384076 107 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 RNU6-378P-201ENST00000384324 107 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 RNU6-784P-201ENST00000384330 106 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 AL355497.1-201ENST00000406262 551 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 MIR548F5-201ENST00000408421 86 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 AC074085.1-201ENST00000413598 418 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 PDCL2P1-201ENST00000419302 352 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 AC098614.3-201ENST00000438957 440 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 snoU13.6-201ENST00000458785 104 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 AC018868.1-201ENST00000491307 315 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 HMGN1P12-201ENST00000499125 195 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.06□□□□□ -2.08
CDCA3Q99618 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.06□□□□□ -2.08
CDCA3Q99618 CYCSP26-201ENST00000534107 320 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 AC109446.1-201ENST00000566172 220 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 MIR4781-201ENST00000585250 76 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 AC022306.2-201ENST00000617563 647 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.06□□□□□ -2.08
CDCA3Q99618 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CDCA3Q99618 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CDCA3Q99618 MIR378A-201ENST00000362177 66 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 SNORD50.1-201ENST00000362987 71 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 RNU6-1286P-201ENST00000383871 107 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 RNU1-148P-201ENST00000384472 162 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 SNORA46.1-201ENST00000391069 153 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 MTCYBP2-201ENST00000407745 171 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 MIR548K-201ENST00000408406 116 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 U3.40-201ENST00000408706 208 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 AC027124.2-201ENST00000428249 105 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 USP9YP30-201ENST00000430729 455 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 RPS3AP52-201ENST00000435639 297 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 DAP3P1-201ENST00000441522 278 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 MTND3P10-201ENST00000450967 341 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 RPL23AP63-201ENST00000498752 471 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.05□□□□□ -2.08
CDCA3Q99618 AC103851.1-201ENST00000506833 274 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.05□□□□□ -2.08
CDCA3Q99618 SNORA4.4-201ENST00000515921 135 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 MIR449C-201ENST00000516047 92 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 RNU6-567P-201ENST00000516746 107 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 MIR514B-201ENST00000516774 80 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 CYP4A27P-201ENST00000567218 190 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 AC005730.3-201ENST00000583067 366 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 PCGEM1.1-201ENST00000613431 131 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.05□□□□□ -2.08
CDCA3Q99618 AC233981.2-201ENST00000611524 1614 ntBASIC2.05□□□□□ -2.08
CDCA3Q99618 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.05□□□□□ -2.08
CDCA3Q99618 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CDCA3Q99618 MIR337-201ENST00000362281 93 ntBASIC2.04□□□□□ -2.08
CDCA3Q99618 RNU6-1059P-201ENST00000363752 98 ntBASIC2.04□□□□□ -2.08
CDCA3Q99618 Y_RNA.184-201ENST00000363884 108 ntBASIC2.04□□□□□ -2.08
CDCA3Q99618 RNU6-743P-201ENST00000364151 106 ntBASIC2.04□□□□□ -2.08
CDCA3Q99618 SNORD81.2-201ENST00000365153 76 ntBASIC2.04□□□□□ -2.08
CDCA3Q99618 RNA5SP190-201ENST00000365222 118 ntBASIC2.04□□□□□ -2.08
CDCA3Q99618 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms