Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AL133216.2-202ENST00000634512 349 ntBASIC2□□□□□ -2.09
NDNQ99608 MIR219B-201ENST00000637023 88 ntBASIC2□□□□□ -2.09
NDNQ99608 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2□□□□□ -2.09
NDNQ99608 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2□□□□□ -2.09
NDNQ99608 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
NDNQ99608 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NDNQ99608 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
NDNQ99608 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NDNQ99608 RNU6-1283P-201ENST00000365314 105 ntBASIC1.99□□□□□ -2.09
NDNQ99608 AL357139.1-201ENST00000407792 426 ntBASIC1.99□□□□□ -2.09
NDNQ99608 RN7SKP284-201ENST00000411002 343 ntBASIC1.99□□□□□ -2.09
NDNQ99608 AC138393.2-201ENST00000414742 246 ntBASIC1.99□□□□□ -2.09
NDNQ99608 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.99□□□□□ -2.09
NDNQ99608 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.99□□□□□ -2.09
NDNQ99608 Z82205.1-201ENST00000428456 297 ntBASIC1.99□□□□□ -2.09
NDNQ99608 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NDNQ99608 FTH1P25-201ENST00000447665 469 ntBASIC1.99□□□□□ -2.09
NDNQ99608 AC079354.2-201ENST00000453523 154 ntBASIC1.99□□□□□ -2.09
NDNQ99608 PRELID3BP1-201ENST00000457142 540 ntBASIC1.99□□□□□ -2.09
NDNQ99608 PMCHL2-203ENST00000457791 237 ntBASIC1.99□□□□□ -2.09
NDNQ99608 SNORD5.1-201ENST00000458800 75 ntBASIC1.99□□□□□ -2.09
NDNQ99608 RNA5SP233-201ENST00000459153 113 ntBASIC1.99□□□□□ -2.09
NDNQ99608 RPL23AP75-201ENST00000491601 451 ntBASIC1.99□□□□□ -2.09
NDNQ99608 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.99□□□□□ -2.09
NDNQ99608 ANXA2P1-201ENST00000505539 926 ntBASIC1.99□□□□□ -2.09
NDNQ99608 AC116337.1-201ENST00000509680 687 ntBASIC1.99□□□□□ -2.09
NDNQ99608 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.99□□□□□ -2.09
NDNQ99608 RNU7-30P-201ENST00000516835 62 ntBASIC1.99□□□□□ -2.09
NDNQ99608 AC005668.1-201ENST00000571142 476 ntBASIC1.99□□□□□ -2.09
NDNQ99608 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.99□□□□□ -2.09
NDNQ99608 AL031274.2-201ENST00000599419 203 ntBASIC1.99□□□□□ -2.09
NDNQ99608 AC009318.2-201ENST00000610917 651 ntBASIC1.99□□□□□ -2.09
NDNQ99608 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
NDNQ99608 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
NDNQ99608 RNU6-234P-201ENST00000365229 104 ntBASIC1.98□□□□□ -2.09
NDNQ99608 RNU6-174P-201ENST00000410406 106 ntBASIC1.98□□□□□ -2.09
NDNQ99608 NCOR1P3-201ENST00000420479 303 ntBASIC1.98□□□□□ -2.09
NDNQ99608 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.98□□□□□ -2.09
NDNQ99608 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.98□□□□□ -2.09
NDNQ99608 AC107399.1-201ENST00000451226 265 ntBASIC1.98□□□□□ -2.09
NDNQ99608 OR2AQ1P-201ENST00000451972 200 ntBASIC1.98□□□□□ -2.09
NDNQ99608 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.98□□□□□ -2.09
NDNQ99608 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.98□□□□□ -2.09
NDNQ99608 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.98□□□□□ -2.09
NDNQ99608 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.98□□□□□ -2.09
NDNQ99608 snoU13.6-201ENST00000458785 104 ntBASIC1.98□□□□□ -2.09
NDNQ99608 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.98□□□□□ -2.09
NDNQ99608 SNORA20.3-201ENST00000516880 132 ntBASIC1.98□□□□□ -2.09
NDNQ99608 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.98□□□□□ -2.09
NDNQ99608 AC091544.4-201ENST00000555268 342 ntBASIC1.98□□□□□ -2.09
NDNQ99608 MIR5696-201ENST00000578474 85 ntBASIC1.98□□□□□ -2.09
NDNQ99608 MIR5089-201ENST00000580047 84 ntBASIC1.98□□□□□ -2.09
NDNQ99608 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.98□□□□□ -2.09
NDNQ99608 MIR4273-201ENST00000582824 84 ntBASIC1.98□□□□□ -2.09
NDNQ99608 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.98□□□□□ -2.09
NDNQ99608 SCARNA4-201ENST00000629045 128 ntBASIC1.98□□□□□ -2.09
NDNQ99608 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
NDNQ99608 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
NDNQ99608 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NDNQ99608 MTND5P9-201ENST00000503854 1755 ntBASIC1.98□□□□□ -2.09
NDNQ99608 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.97□□□□□ -2.09
NDNQ99608 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.97□□□□□ -2.09
NDNQ99608 RNU4-9P-201ENST00000364951 139 ntBASIC1.97□□□□□ -2.09
NDNQ99608 Y_RNA.339-201ENST00000365325 102 ntBASIC1.97□□□□□ -2.09
NDNQ99608 RNU6-306P-201ENST00000384617 107 ntBASIC1.97□□□□□ -2.09
NDNQ99608 MIR29C-201ENST00000385231 88 ntBASIC1.97□□□□□ -2.09
NDNQ99608 RNA5SP489-201ENST00000410986 109 ntBASIC1.97□□□□□ -2.09
NDNQ99608 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.97□□□□□ -2.09
NDNQ99608 HMGB1P18-201ENST00000438801 619 ntBASIC1.97□□□□□ -2.09
NDNQ99608 MTND3P10-201ENST00000450967 341 ntBASIC1.97□□□□□ -2.09
NDNQ99608 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.97□□□□□ -2.09
NDNQ99608 AC087477.1-201ENST00000465747 340 ntBASIC1.97□□□□□ -2.09
NDNQ99608 AC107032.1-201ENST00000485945 480 ntBASIC1.97□□□□□ -2.09
NDNQ99608 AF186996.7-201ENST00000492781 209 ntBASIC1.97□□□□□ -2.09
NDNQ99608 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.97□□□□□ -2.09
NDNQ99608 SNORA31.25-201ENST00000517242 134 ntBASIC1.97□□□□□ -2.09
NDNQ99608 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.97□□□□□ -2.09
NDNQ99608 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.97□□□□□ -2.09
NDNQ99608 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.97□□□□□ -2.09
NDNQ99608 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.97□□□□□ -2.09
NDNQ99608 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.97□□□□□ -2.09
NDNQ99608 AC090517.1-201ENST00000569307 266 ntBASIC1.97□□□□□ -2.09
NDNQ99608 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.97□□□□□ -2.09
NDNQ99608 uc_338.5-201ENST00000611839 155 ntBASIC1.97□□□□□ -2.09
NDNQ99608 AC022202.1-201ENST00000613515 211 ntBASIC1.97□□□□□ -2.09
NDNQ99608 AL359314.1-201ENST00000616913 261 ntBASIC1.97□□□□□ -2.09
NDNQ99608 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.97□□□□□ -2.09
NDNQ99608 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NDNQ99608 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.96□□□□□ -2.1
NDNQ99608 RNU6-743P-201ENST00000364151 106 ntBASIC1.96□□□□□ -2.1
NDNQ99608 Y_RNA.482-201ENST00000384377 111 ntBASIC1.96□□□□□ -2.1
NDNQ99608 HMGN2P39-201ENST00000398005 273 ntBASIC1.96□□□□□ -2.1
NDNQ99608 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.96□□□□□ -2.1
NDNQ99608 RNU2-2P-201ENST00000410396 191 ntBASIC1.96□□□□□ -2.1
NDNQ99608 RNU2-20P-201ENST00000410425 191 ntBASIC1.96□□□□□ -2.1
NDNQ99608 RNU2-41P-201ENST00000410991 178 ntBASIC1.96□□□□□ -2.1
NDNQ99608 USP9YP30-201ENST00000430729 455 ntBASIC1.96□□□□□ -2.1
NDNQ99608 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.96□□□□□ -2.1
NDNQ99608 AC098614.3-201ENST00000438957 440 ntBASIC1.96□□□□□ -2.1
NDNQ99608 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms