Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 AC136932.1-201ENST00000574771 208 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 AL590229.1-201ENST00000603497 542 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 AC012507.3-201ENST00000603556 477 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 AL031281.1-201ENST00000604049 488 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 MZT1P2-201ENST00000604387 248 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 MIR3976-201ENST00000606807 139 ntBASIC0.69□□□□□ -2.3
SCAF11Q99590 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
SCAF11Q99590 SNORD31B-201ENST00000364977 69 ntBASIC0.68□□□□□ -2.3
SCAF11Q99590 Y_RNA.324-201ENST00000365165 102 ntBASIC0.68□□□□□ -2.3
SCAF11Q99590 MIR194-1-201ENST00000384892 85 ntBASIC0.68□□□□□ -2.3
SCAF11Q99590 Y_RNA.608-201ENST00000410647 95 ntBASIC0.68□□□□□ -2.3
SCAF11Q99590 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.68□□□□□ -2.3
SCAF11Q99590 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.68□□□□□ -2.3
SCAF11Q99590 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SCAF11Q99590 AC091951.3-201ENST00000504093 246 ntBASIC0.68□□□□□ -2.3
SCAF11Q99590 AC104136.1-201ENST00000512969 394 ntBASIC0.68□□□□□ -2.3
SCAF11Q99590 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.68□□□□□ -2.3
SCAF11Q99590 RNU5F-4P-201ENST00000516581 114 ntBASIC0.68□□□□□ -2.3
SCAF11Q99590 RNU6-1098P-201ENST00000516772 96 ntBASIC0.68□□□□□ -2.3
SCAF11Q99590 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.68□□□□□ -2.3
SCAF11Q99590 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.68□□□□□ -2.3
SCAF11Q99590 HMGN1P30-201ENST00000589286 268 ntBASIC0.68□□□□□ -2.3
SCAF11Q99590 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.68□□□□□ -2.3
SCAF11Q99590 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.68□□□□□ -2.3
SCAF11Q99590 AC068787.1-201ENST00000623908 691 ntBASIC0.68□□□□□ -2.3
SCAF11Q99590 RNU6-179P-201ENST00000363350 107 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 Y_RNA.132-201ENST00000363421 102 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 U3.9-201ENST00000363823 204 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 RNU1-96P-201ENST00000364163 162 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 RNY1P12-201ENST00000364251 105 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 SNORA63D-201ENST00000364359 132 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 RNU6-116P-201ENST00000384042 109 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 RNU6-968P-201ENST00000384076 107 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 RNU6-692P-201ENST00000384496 107 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 RNA5SP201-201ENST00000410316 124 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.67□□□□□ -2.3
SCAF11Q99590 HIGD1AP15-201ENST00000416198 280 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 Z95118.1-201ENST00000421372 247 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 MTCO3P29-201ENST00000432119 779 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.67□□□□□ -2.3
SCAF11Q99590 GAPDHP17-201ENST00000449858 1001 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 RNU6-685P-201ENST00000517088 95 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 AL512310.8-201ENST00000550183 120 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 ZNF321P-202ENST00000550843 495 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 PCMTD1P2-201ENST00000565017 355 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 AL451064.1-201ENST00000607718 471 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 PCGEM1.1-201ENST00000613431 131 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 AC104010.1-201ENST00000616889 150 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 AC012676.2-201ENST00000619258 186 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 AC019226.2-201ENST00000625973 424 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 MTND4P14-201ENST00000435799 1354 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
SCAF11Q99590 RNU6-45P-201ENST00000384471 107 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 RNU6-331P-201ENST00000384724 107 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 Y_RNA.576-201ENST00000384781 102 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 AC114737.2-201ENST00000421583 173 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 AC073910.1-201ENST00000445047 438 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 snoU13.19-201ENST00000459148 104 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 snoU13.27-201ENST00000459278 104 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.67□□□□□ -2.3
SCAF11Q99590 MIR4802-201ENST00000581881 80 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 BNIP3P16-201ENST00000589779 534 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 AC009878.1-201ENST00000621819 340 ntBASIC0.67□□□□□ -2.3
SCAF11Q99590 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
SCAF11Q99590 AL391994.1-201ENST00000254724 282 ntBASIC0.66□□□□□ -2.3
SCAF11Q99590 Y_RNA.22-201ENST00000362492 102 ntBASIC0.66□□□□□ -2.3
SCAF11Q99590 U3.4-201ENST00000363352 213 ntBASIC0.66□□□□□ -2.3
SCAF11Q99590 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.66□□□□□ -2.3
SCAF11Q99590 RPS23P5-201ENST00000495419 428 ntBASIC0.66□□□□□ -2.3
SCAF11Q99590 AC116562.3-201ENST00000506136 177 ntBASIC0.66□□□□□ -2.3
SCAF11Q99590 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.66□□□□□ -2.3
SCAF11Q99590 RNU6-1041P-201ENST00000516254 102 ntBASIC0.66□□□□□ -2.3
SCAF11Q99590 AC109479.2-201ENST00000517842 174 ntBASIC0.66□□□□□ -2.3
SCAF11Q99590 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.66□□□□□ -2.3
SCAF11Q99590 CENPUP1-201ENST00000526649 1202 ntBASIC0.66□□□□□ -2.3
SCAF11Q99590 AC068587.5-201ENST00000528506 175 ntBASIC0.66□□□□□ -2.3
SCAF11Q99590 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
SCAF11Q99590 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.66□□□□□ -2.3
SCAF11Q99590 AC021231.3-201ENST00000558497 370 ntBASIC0.66□□□□□ -2.3
SCAF11Q99590 AL356157.2-201ENST00000605122 111 ntBASIC0.66□□□□□ -2.3
SCAF11Q99590 AL365434.2-201ENST00000607979 234 ntBASIC0.66□□□□□ -2.3
SCAF11Q99590 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.66□□□□□ -2.3
SCAF11Q99590 AC136475.10-201ENST00000620253 385 ntBASIC0.66□□□□□ -2.3
SCAF11Q99590 AL445984.1-201ENST00000637834 659 ntBASIC0.66□□□□□ -2.3
SCAF11Q99590 RNU6-428P-201ENST00000362942 107 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 RNU6-501P-201ENST00000364072 100 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 RNU6-378P-201ENST00000384324 107 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
SCAF11Q99590 RNA5SP299-201ENST00000391203 116 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.65□□□□□ -2.31
SCAF11Q99590 COX6CP10-201ENST00000416832 224 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.65□□□□□ -2.31
SCAF11Q99590 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.65□□□□□ -2.31
SCAF11Q99590 MTATP6P16-201ENST00000434543 526 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 AC069257.2-201ENST00000441819 155 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 HSPE1P13-201ENST00000451143 297 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 AC016925.1-201ENST00000458303 298 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 RPS26P45-201ENST00000471748 340 ntBASIC0.65□□□□□ -2.31
SCAF11Q99590 AC112206.4-201ENST00000515142 405 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms