Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
NOTCH4Q99466 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NOTCH4Q99466 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NOTCH4Q99466 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NOTCH4Q99466 RNU6-335P-201ENST00000364563 113 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 Y_RNA.343-201ENST00000365354 112 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RNA5SP240-201ENST00000365355 128 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RNU6-629P-201ENST00000384061 103 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RNU6-166P-201ENST00000384371 107 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RNA5SP56-201ENST00000410277 118 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RNU6-1135P-201ENST00000411083 103 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 AL135786.1-201ENST00000415892 214 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 AC098614.2-201ENST00000426040 255 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RPL23AP14-201ENST00000468281 468 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.54□□□□□ -2
NOTCH4Q99466 AC074198.2-201ENST00000508153 258 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RNU7-175P-201ENST00000515915 61 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 IGKV3-31-201ENST00000523109 329 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.54□□□□□ -2
NOTCH4Q99466 AP004371.1-201ENST00000525240 214 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 AP004242.1-201ENST00000533701 349 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 MIR3133-201ENST00000583157 78 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 AL590240.4-201ENST00000616908 390 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.54□□□□□ -2
NOTCH4Q99466 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.54□□□□□ -2
NOTCH4Q99466 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.54□□□□□ -2
NOTCH4Q99466 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.54□□□□□ -2
NOTCH4Q99466 AC233981.2-201ENST00000611524 1614 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
NOTCH4Q99466 UBE2WP1-201ENST00000362030 340 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RNU6-858P-201ENST00000362436 107 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 Y_RNA.33-201ENST00000362591 102 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RNA5SP295-201ENST00000362655 121 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 Y_RNA.199-201ENST00000364014 102 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 Y_RNA.275-201ENST00000364726 110 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RNU6-1286P-201ENST00000383871 107 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RNU6-17P-201ENST00000384245 107 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 SNORD63-201ENST00000384262 68 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RNU6-18P-201ENST00000384527 107 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 AC007064.1-201ENST00000412238 351 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 AC018634.1-201ENST00000437554 401 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 AL353705.4-201ENST00000449661 238 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 NDUFB4P10-201ENST00000452541 359 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RPS20P22-201ENST00000473700 357 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RNU7-200P-201ENST00000516105 62 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RNU6-1256P-201ENST00000516539 103 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 RN7SKP49-201ENST00000516675 260 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 ATP5F1P5-201ENST00000526403 760 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.54□□□□□ -2
NOTCH4Q99466 AC093023.1-201ENST00000547375 507 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 SYF2P1-201ENST00000550658 413 ntBASIC2.54□□□□□ -2
NOTCH4Q99466 Y_RNA.123-201ENST00000363338 102 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.53□□□□□ -2
NOTCH4Q99466 RNU6-741P-201ENST00000383889 107 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 RNY1P5-201ENST00000383890 115 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 MIR10B-201ENST00000385011 110 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.53□□□□□ -2
NOTCH4Q99466 RNU6-493P-201ENST00000391321 108 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 Y_RNA.590-201ENST00000410140 107 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.53□□□□□ -2
NOTCH4Q99466 AC007560.1-201ENST00000426912 237 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 RNA5SP290-201ENST00000517133 127 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 AP005660.1-201ENST00000522972 293 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.53□□□□□ -2
NOTCH4Q99466 MED28P6-201ENST00000558776 231 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 MIR5701-3-201ENST00000578890 82 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 MIR5701-1-201ENST00000585138 82 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 SNORD113-5-201ENST00000607261 78 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 MIR5701-2-201ENST00000615634 82 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.53□□□□□ -2
NOTCH4Q99466 AL359854.1-201ENST00000614203 1594 ntBASIC2.53□□□□□ -2
NOTCH4Q99466 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
NOTCH4Q99466 AC009487.2-201ENST00000420969 6821 ntBASIC2.53□□□□□ -2.01
NOTCH4Q99466 MIR514A1-201ENST00000385133 98 ntBASIC2.52□□□□□ -2.01
NOTCH4Q99466 AL590004.2-201ENST00000404787 371 ntBASIC2.52□□□□□ -2.01
NOTCH4Q99466 Y_RNA.626-201ENST00000411288 95 ntBASIC2.52□□□□□ -2.01
NOTCH4Q99466 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.52□□□□□ -2.01
NOTCH4Q99466 AL078601.1-201ENST00000444542 271 ntBASIC2.52□□□□□ -2.01
NOTCH4Q99466 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.52□□□□□ -2.01
NOTCH4Q99466 AP001324.2-201ENST00000461163 319 ntBASIC2.52□□□□□ -2.01
NOTCH4Q99466 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.52□□□□□ -2.01
NOTCH4Q99466 AC027288.2-201ENST00000553028 243 ntBASIC2.52□□□□□ -2.01
NOTCH4Q99466 MIR3144-201ENST00000579460 79 ntBASIC2.52□□□□□ -2.01
NOTCH4Q99466 AL158827.2-201ENST00000602494 330 ntBASIC2.52□□□□□ -2.01
NOTCH4Q99466 U4.3-201ENST00000621047 82 ntBASIC2.52□□□□□ -2.01
NOTCH4Q99466 AL691447.3-201ENST00000635020 330 ntBASIC2.52□□□□□ -2.01
NOTCH4Q99466 AC241585.2-209ENST00000638217 143 ntBASIC2.52□□□□□ -2.01
NOTCH4Q99466 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.52□□□□□ -2.01
NOTCH4Q99466 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
NOTCH4Q99466 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.52□□□□□ -2.01
NOTCH4Q99466 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.52□□□□□ -2.01
NOTCH4Q99466 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
NOTCH4Q99466 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
NOTCH4Q99466 RNU6-1301P-201ENST00000362724 104 ntBASIC2.52□□□□□ -2.01
NOTCH4Q99466 RNU6-1167P-201ENST00000363227 94 ntBASIC2.52□□□□□ -2.01
NOTCH4Q99466 SNORD113-8-201ENST00000363497 74 ntBASIC2.52□□□□□ -2.01
NOTCH4Q99466 RNU6-959P-201ENST00000384671 107 ntBASIC2.52□□□□□ -2.01
NOTCH4Q99466 MIR764-201ENST00000390811 85 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms