Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 RPL30P1-201ENST00000488676 339 ntBASIC2.57□□□□□ -2
SIN3AQ96ST3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.57□□□□□ -2
SIN3AQ96ST3 RNU5F-2P-201ENST00000516066 82 ntBASIC2.57□□□□□ -2
SIN3AQ96ST3 RNU2-53P-201ENST00000516257 147 ntBASIC2.57□□□□□ -2
SIN3AQ96ST3 Y_RNA.708-201ENST00000516950 96 ntBASIC2.57□□□□□ -2
SIN3AQ96ST3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.57□□□□□ -2
SIN3AQ96ST3 MIR3616-201ENST00000584070 92 ntBASIC2.57□□□□□ -2
SIN3AQ96ST3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.56□□□□□ -2
SIN3AQ96ST3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.56□□□□□ -2
SIN3AQ96ST3 Y_RNA.61-201ENST00000362835 102 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 RNU6-655P-201ENST00000362858 107 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 SNORA36A-201ENST00000384221 132 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 RNU6-1297P-201ENST00000384415 104 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 Y_RNA.504-201ENST00000384481 104 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.56□□□□□ -2
SIN3AQ96ST3 RNU6-220P-201ENST00000390919 107 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 SNORA75.4-201ENST00000391278 119 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 AL591034.2-201ENST00000402839 359 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 U6atac.2-201ENST00000408644 118 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.56□□□□□ -2
SIN3AQ96ST3 FO393415.2-201ENST00000480085 343 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.56□□□□□ -2
SIN3AQ96ST3 SNORA31.16-201ENST00000516773 139 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 AC115990.1-201ENST00000526957 301 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.56□□□□□ -2
SIN3AQ96ST3 MRPS36P4-201ENST00000534436 298 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 AC105245.1-201ENST00000581934 244 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 AL078605.1-201ENST00000603529 500 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 MTND4LP32-201ENST00000636111 270 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 AL669831.3-213ENST00000636676 183 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 AP000560.1-201ENST00000624150 1937 ntBASIC2.56□□□□□ -2
SIN3AQ96ST3 RNU6-797P-201ENST00000363101 109 ntBASIC2.55□□□□□ -2
SIN3AQ96ST3 RNU6-1210P-201ENST00000363775 107 ntBASIC2.55□□□□□ -2
SIN3AQ96ST3 Y_RNA.384-201ENST00000383909 102 ntBASIC2.55□□□□□ -2
SIN3AQ96ST3 RNU4-52P-201ENST00000384209 138 ntBASIC2.55□□□□□ -2
SIN3AQ96ST3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.55□□□□□ -2
SIN3AQ96ST3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.55□□□□□ -2
SIN3AQ96ST3 EIF4EP2-201ENST00000422816 654 ntBASIC2.55□□□□□ -2
SIN3AQ96ST3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.55□□□□□ -2
SIN3AQ96ST3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.55□□□□□ -2
SIN3AQ96ST3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.55□□□□□ -2
SIN3AQ96ST3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.55□□□□□ -2
SIN3AQ96ST3 AC104564.1-201ENST00000493028 407 ntBASIC2.55□□□□□ -2
SIN3AQ96ST3 AC016632.1-201ENST00000503994 196 ntBASIC2.55□□□□□ -2
SIN3AQ96ST3 AC023141.11-201ENST00000508864 202 ntBASIC2.55□□□□□ -2
SIN3AQ96ST3 AC005741.1-201ENST00000511094 432 ntBASIC2.55□□□□□ -2
SIN3AQ96ST3 Y_RNA.675-201ENST00000516389 149 ntBASIC2.55□□□□□ -2
SIN3AQ96ST3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.55□□□□□ -2
SIN3AQ96ST3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.55□□□□□ -2
SIN3AQ96ST3 MIR5571-201ENST00000577998 113 ntBASIC2.55□□□□□ -2
SIN3AQ96ST3 MIR3117-201ENST00000584034 78 ntBASIC2.55□□□□□ -2
SIN3AQ96ST3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.55□□□□□ -2
SIN3AQ96ST3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
SIN3AQ96ST3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.54□□□□□ -2
SIN3AQ96ST3 MTND4P27-201ENST00000450813 1354 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 AC092268.1-201ENST00000342691 405 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 RNU6-310P-201ENST00000384655 107 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 RNY4P36-201ENST00000391116 96 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 CBX3P9-201ENST00000402326 552 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 Y_RNA.646-201ENST00000410980 101 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 MTND3P23-201ENST00000431980 347 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.54□□□□□ -2
SIN3AQ96ST3 AL353752.1-201ENST00000454946 260 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 SNORD19B-201ENST00000459623 84 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.54□□□□□ -2
SIN3AQ96ST3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.54□□□□□ -2
SIN3AQ96ST3 AC140059.1-201ENST00000489238 361 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 HMGB1P35-201ENST00000503360 598 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 RNA5SP384-201ENST00000516615 116 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 RNA5SP364-201ENST00000516938 78 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 RNU6-250P-201ENST00000516958 103 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 Y_RNA.718-201ENST00000517110 102 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 AC093249.1-201ENST00000567049 203 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 MIR5696-201ENST00000578474 85 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.54□□□□□ -2
SIN3AQ96ST3 RPL30P11-203ENST00000598995 310 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 AL713866.2-201ENST00000603579 219 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 AC069294.1-201ENST00000608397 350 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 HMGB1P24-202ENST00000615653 685 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.54□□□□□ -2
SIN3AQ96ST3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.54□□□□□ -2
SIN3AQ96ST3 SNORD98-201ENST00000636377 67 ntBASIC2.54□□□□□ -2
SIN3AQ96ST3 RNU6-1286P-201ENST00000383871 107 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 SNORA29-201ENST00000384183 140 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 Y_RNA.533-201ENST00000384596 114 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 RNU6-331P-201ENST00000384724 107 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 AF228730.4-201ENST00000421457 183 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 AL590135.1-201ENST00000422215 156 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 AC019205.3-201ENST00000424573 156 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 USMG5P1-201ENST00000425964 177 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.53□□□□□ -2
SIN3AQ96ST3 AL591806.2-201ENST00000433122 173 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 GPM6BP3-201ENST00000442797 145 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.53□□□□□ -2
SIN3AQ96ST3 AC016700.2-201ENST00000446011 156 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 AC011753.1-201ENST00000451001 220 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 MTCO3P10-201ENST00000455912 772 ntBASIC2.53□□□□□ -2
SIN3AQ96ST3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.53□□□□□ -2
SIN3AQ96ST3 AC080013.2-201ENST00000460866 323 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms