Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNU6-142P-201ENST00000384019 107 ntBASIC-0.14□□□□□ -2.43
IFT140Q96RY7 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.14□□□□□ -2.43
IFT140Q96RY7 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.14□□□□□ -2.43
IFT140Q96RY7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
IFT140Q96RY7 RNA5SP504-201ENST00000410676 117 ntBASIC-0.14□□□□□ -2.43
IFT140Q96RY7 SNRPGP12-201ENST00000449481 213 ntBASIC-0.14□□□□□ -2.43
IFT140Q96RY7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.14□□□□□ -2.43
IFT140Q96RY7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.14□□□□□ -2.43
IFT140Q96RY7 AC106038.2-201ENST00000520706 568 ntBASIC-0.14□□□□□ -2.43
IFT140Q96RY7 AC027419.1-201ENST00000522976 328 ntBASIC-0.14□□□□□ -2.43
IFT140Q96RY7 DEFB108A-201ENST00000530110 222 ntBASIC-0.14□□□□□ -2.43
IFT140Q96RY7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.14□□□□□ -2.43
IFT140Q96RY7 AL357312.1-201ENST00000603879 298 ntBASIC-0.14□□□□□ -2.43
IFT140Q96RY7 AL138889.2-201ENST00000603883 242 ntBASIC-0.14□□□□□ -2.43
IFT140Q96RY7 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.14□□□□□ -2.43
IFT140Q96RY7 U6.42-201ENST00000618440 107 ntBASIC-0.14□□□□□ -2.43
IFT140Q96RY7 AC104985.3-201ENST00000623479 597 ntBASIC-0.14□□□□□ -2.43
IFT140Q96RY7 AC099654.8-201ENST00000637757 681 ntBASIC-0.14□□□□□ -2.43
IFT140Q96RY7 MIR409-201ENST00000362237 79 ntBASIC-0.15□□□□□ -2.43
IFT140Q96RY7 RNA5SP214-201ENST00000363378 118 ntBASIC-0.15□□□□□ -2.43
IFT140Q96RY7 RNU4-48P-201ENST00000365559 182 ntBASIC-0.15□□□□□ -2.43
IFT140Q96RY7 AL451046.2-201ENST00000403074 277 ntBASIC-0.15□□□□□ -2.43
IFT140Q96RY7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.15□□□□□ -2.43
IFT140Q96RY7 HMGB1P29-201ENST00000505659 499 ntBASIC-0.15□□□□□ -2.43
IFT140Q96RY7 SNORA70.12-201ENST00000516084 153 ntBASIC-0.15□□□□□ -2.43
IFT140Q96RY7 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.15□□□□□ -2.43
IFT140Q96RY7 AP003049.1-201ENST00000529418 457 ntBASIC-0.15□□□□□ -2.43
IFT140Q96RY7 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.15□□□□□ -2.43
IFT140Q96RY7 AC090186.1-201ENST00000605991 572 ntBASIC-0.15□□□□□ -2.43
IFT140Q96RY7 AL136317.1-201ENST00000612653 226 ntBASIC-0.15□□□□□ -2.43
IFT140Q96RY7 MIR4315-1-201ENST00000636800 73 ntBASIC-0.15□□□□□ -2.43
IFT140Q96RY7 MIR4315-2-201ENST00000640925 73 ntBASIC-0.15□□□□□ -2.43
IFT140Q96RY7 MIR214-201ENST00000385214 110 ntBASIC-0.16□□□□□ -2.43
IFT140Q96RY7 MIR653-201ENST00000385279 96 ntBASIC-0.16□□□□□ -2.43
IFT140Q96RY7 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.16□□□□□ -2.43
IFT140Q96RY7 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.16□□□□□ -2.43
IFT140Q96RY7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.16□□□□□ -2.43
IFT140Q96RY7 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.16□□□□□ -2.43
IFT140Q96RY7 AL133217.1-201ENST00000450980 425 ntBASIC-0.16□□□□□ -2.43
IFT140Q96RY7 AL163973.1-201ENST00000484753 577 ntBASIC-0.16□□□□□ -2.43
IFT140Q96RY7 RNA5SP227-201ENST00000516184 113 ntBASIC-0.16□□□□□ -2.43
IFT140Q96RY7 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.16□□□□□ -2.43
IFT140Q96RY7 AC090049.2-201ENST00000550377 109 ntBASIC-0.16□□□□□ -2.43
IFT140Q96RY7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.16□□□□□ -2.43
IFT140Q96RY7 MIR3678-201ENST00000578455 94 ntBASIC-0.16□□□□□ -2.43
IFT140Q96RY7 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.16□□□□□ -2.43
IFT140Q96RY7 AC104073.3-201ENST00000610942 955 ntBASIC-0.16□□□□□ -2.43
IFT140Q96RY7 AL354696.1-201ENST00000614652 497 ntBASIC-0.16□□□□□ -2.43
IFT140Q96RY7 AC073349.3-201ENST00000617616 186 ntBASIC-0.16□□□□□ -2.43
IFT140Q96RY7 SNORD98-201ENST00000636377 67 ntBASIC-0.16□□□□□ -2.43
IFT140Q96RY7 RNA5SP264-201ENST00000363115 107 ntBASIC-0.16□□□□□ -2.44
IFT140Q96RY7 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.16□□□□□ -2.44
IFT140Q96RY7 SNORA33-201ENST00000363664 130 ntBASIC-0.16□□□□□ -2.44
IFT140Q96RY7 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.16□□□□□ -2.44
IFT140Q96RY7 RNU6-883P-201ENST00000384597 107 ntBASIC-0.16□□□□□ -2.44
IFT140Q96RY7 AL359704.1-201ENST00000411586 781 ntBASIC-0.16□□□□□ -2.44
IFT140Q96RY7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.16□□□□□ -2.44
IFT140Q96RY7 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.16□□□□□ -2.44
IFT140Q96RY7 AC010468.3-201ENST00000508225 458 ntBASIC-0.16□□□□□ -2.44
IFT140Q96RY7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.16□□□□□ -2.44
IFT140Q96RY7 AC023827.1-201ENST00000569247 97 ntBASIC-0.16□□□□□ -2.44
IFT140Q96RY7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.16□□□□□ -2.44
IFT140Q96RY7 SNRPGP20-201ENST00000604477 205 ntBASIC-0.16□□□□□ -2.44
IFT140Q96RY7 RNU6-792P-201ENST00000363490 107 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 SNORD114-9-201ENST00000364370 72 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 AL603865.2-201ENST00000401679 213 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 MTCYBP2-201ENST00000407745 171 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 BX664727.1-201ENST00000416024 466 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.17□□□□□ -2.44
IFT140Q96RY7 MTCO2P34-201ENST00000421994 607 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.17□□□□□ -2.44
IFT140Q96RY7 AL162725.1-201ENST00000435405 301 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 MTCYBP39-201ENST00000437562 491 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.17□□□□□ -2.44
IFT140Q96RY7 AC104332.1-201ENST00000440471 797 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 AC245047.8-201ENST00000456455 284 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 AC119751.4-201ENST00000507498 357 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 SNORA31.10-201ENST00000516482 106 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.17□□□□□ -2.44
IFT140Q96RY7 DEFB131D-201ENST00000526803 184 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 MIR4645-201ENST00000583158 77 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 AC131055.1-201ENST00000584626 316 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 AC012507.3-201ENST00000603556 477 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 AL022154.1-201ENST00000604698 785 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.17□□□□□ -2.44
IFT140Q96RY7 AC136475.10-201ENST00000620253 385 ntBASIC-0.17□□□□□ -2.44
IFT140Q96RY7 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
IFT140Q96RY7 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.18□□□□□ -2.44
IFT140Q96RY7 RNU6-177P-201ENST00000411257 104 ntBASIC-0.18□□□□□ -2.44
IFT140Q96RY7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.18□□□□□ -2.44
IFT140Q96RY7 AC092809.3-201ENST00000415453 231 ntBASIC-0.18□□□□□ -2.44
IFT140Q96RY7 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.18□□□□□ -2.44
IFT140Q96RY7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.18□□□□□ -2.44
IFT140Q96RY7 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.18□□□□□ -2.44
IFT140Q96RY7 MTND1P22-201ENST00000510572 951 ntBASIC-0.18□□□□□ -2.44
IFT140Q96RY7 AP002001.1-203ENST00000534002 267 ntBASIC-0.18□□□□□ -2.44
IFT140Q96RY7 AC109810.1-201ENST00000534066 224 ntBASIC-0.18□□□□□ -2.44
IFT140Q96RY7 ZNF321P-202ENST00000550843 495 ntBASIC-0.18□□□□□ -2.44
IFT140Q96RY7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.18□□□□□ -2.44
IFT140Q96RY7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms