Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 HULC.1-201ENST00000612720 240 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
COL21A1Q96P44 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 AC139792.2-201ENST00000624218 587 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
COL21A1Q96P44 OR5AK4P-201ENST00000635912 903 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 AC068137.4-201ENST00000638485 296 ntBASIC1.33□□□□□ -2.2
COL21A1Q96P44 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL21A1Q96P44 RNU6-1120P-201ENST00000362988 108 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 Y_RNA.409-201ENST00000383990 98 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.32□□□□□ -2.2
COL21A1Q96P44 SNRPGP13-201ENST00000442212 177 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.32□□□□□ -2.2
COL21A1Q96P44 TOMM22P6-201ENST00000465035 409 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.32□□□□□ -2.2
COL21A1Q96P44 AC021146.2-201ENST00000504736 556 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.32□□□□□ -2.2
COL21A1Q96P44 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.32□□□□□ -2.2
COL21A1Q96P44 HSPE1P4-201ENST00000550617 308 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 AC245505.1-201ENST00000556398 224 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.32□□□□□ -2.2
COL21A1Q96P44 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.32□□□□□ -2.2
COL21A1Q96P44 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.32□□□□□ -2.2
COL21A1Q96P44 AC004223.2-201ENST00000590309 544 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 AC008536.2-201ENST00000607284 349 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 MIR8074-201ENST00000615081 81 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 AC015540.1-201ENST00000615828 501 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 AL158209.2-201ENST00000619266 216 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 AC068792.1-201ENST00000621354 417 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 AC005609.4-201ENST00000625071 447 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 MIR6863-201ENST00000636112 90 ntBASIC1.32□□□□□ -2.2
COL21A1Q96P44 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
COL21A1Q96P44 MTND5P9-201ENST00000503854 1755 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL21A1Q96P44 U8.1-201ENST00000362843 134 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 RNU6-438P-201ENST00000365561 103 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 RNU6-692P-201ENST00000384496 107 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 SNORA16.2-201ENST00000390991 127 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 RNU6-1158P-201ENST00000391167 107 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 CALM2P3-201ENST00000400429 449 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 AC004965.1-201ENST00000413033 213 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 MTCO3P46-201ENST00000425787 232 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 FTH1P12-201ENST00000432137 551 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.31□□□□□ -2.2
COL21A1Q96P44 MTCO1P44-201ENST00000441935 243 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.31□□□□□ -2.2
COL21A1Q96P44 SCARNA18-201ENST00000459004 134 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 RNU7-95P-201ENST00000459222 64 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 AC087477.1-201ENST00000465747 340 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 AC107401.1-201ENST00000503426 685 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 AK3P2-201ENST00000507976 429 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 RNVU1-2-201ENST00000516326 135 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.31□□□□□ -2.2
COL21A1Q96P44 AC016256.1-201ENST00000547971 354 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 CYP4A27P-201ENST00000567218 190 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 MTATP6P3-201ENST00000581686 676 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 MIR4422-201ENST00000581938 83 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 AC107304.1-201ENST00000604229 296 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 AC005520.5-201ENST00000613926 164 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 AL590240.4-201ENST00000616908 390 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 AC124864.2-201ENST00000624736 186 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.31□□□□□ -2.2
COL21A1Q96P44 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL21A1Q96P44 ZNF209P-201ENST00000593450 2304 ntBASIC1.31□□□□□ -2.2
COL21A1Q96P44 Y_RNA.3-201ENST00000362331 103 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 RNU6-266P-201ENST00000364225 107 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 RNU6-1303P-201ENST00000364841 107 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 RNU6-392P-201ENST00000364926 101 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 RNU6-338P-201ENST00000383888 105 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 RNU6-517P-201ENST00000384362 110 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 RNU6-780P-201ENST00000391030 104 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 MTCO3P40-201ENST00000392516 676 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.3□□□□□ -2.2
COL21A1Q96P44 EBAG9P1-201ENST00000418955 543 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.3□□□□□ -2.2
COL21A1Q96P44 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.3□□□□□ -2.2
COL21A1Q96P44 MTCYBP8-201ENST00000422855 651 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 AL606489.2-201ENST00000433886 234 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 AL121601.2-201ENST00000438019 707 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 SNRPFP3-201ENST00000457792 225 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.3□□□□□ -2.2
COL21A1Q96P44 RNU7-167P-201ENST00000459160 62 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.3□□□□□ -2.2
COL21A1Q96P44 RNU6-720P-201ENST00000516363 108 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 RNU1-92P-201ENST00000517017 135 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 SUMO2P18-201ENST00000518873 252 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 AL137161.1-201ENST00000532231 390 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.3□□□□□ -2.2
COL21A1Q96P44 AC011604.1-201ENST00000545978 196 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 EIF4A1P12-201ENST00000551910 141 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 AL161670.1-201ENST00000554348 137 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 AL160236.1-201ENST00000556317 195 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.3□□□□□ -2.2
COL21A1Q96P44 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.3□□□□□ -2.2
COL21A1Q96P44 AP001330.5-201ENST00000607176 411 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 AC092954.2-201ENST00000609103 430 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 AC017083.3-201ENST00000609955 700 ntBASIC1.3□□□□□ -2.2
COL21A1Q96P44 PCGEM1.1-201ENST00000613431 131 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms