Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 MTND5P10-201ENST00000603719 1809 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 ZNF204P-201ENST00000416749 2397 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC138Q96M89 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC138Q96M89 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.69□□□□□ -1.98
CCDC138Q96M89 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCDC138Q96M89 Y_RNA.187-201ENST00000363918 113 ntBASIC2.68□□□□□ -1.98
CCDC138Q96M89 RNU1-112P-201ENST00000364401 164 ntBASIC2.68□□□□□ -1.98
CCDC138Q96M89 DEFA7P-201ENST00000382676 285 ntBASIC2.68□□□□□ -1.98
CCDC138Q96M89 Y_RNA.510-201ENST00000384511 114 ntBASIC2.68□□□□□ -1.98
CCDC138Q96M89 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC138Q96M89 COTL1P1-201ENST00000422309 375 ntBASIC2.68□□□□□ -1.98
CCDC138Q96M89 AC087499.2-201ENST00000432861 149 ntBASIC2.68□□□□□ -1.98
CCDC138Q96M89 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.68□□□□□ -1.98
CCDC138Q96M89 AC107083.1-201ENST00000439643 279 ntBASIC2.68□□□□□ -1.98
CCDC138Q96M89 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC138Q96M89 HMGN2P18-201ENST00000450680 270 ntBASIC2.68□□□□□ -1.98
CCDC138Q96M89 AL139109.1-201ENST00000455491 297 ntBASIC2.68□□□□□ -1.98
CCDC138Q96M89 RNU7-152P-201ENST00000458982 64 ntBASIC2.68□□□□□ -1.98
CCDC138Q96M89 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC138Q96M89 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC138Q96M89 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC138Q96M89 SUB1P3-201ENST00000564581 315 ntBASIC2.68□□□□□ -1.98
CCDC138Q96M89 LARP7P3-201ENST00000579888 337 ntBASIC2.68□□□□□ -1.98
CCDC138Q96M89 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC138Q96M89 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC138Q96M89 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CCDC138Q96M89 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC138Q96M89 Y_RNA.146-201ENST00000363549 102 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 Y_RNA.577-201ENST00000384794 101 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 MIR549A-201ENST00000385268 96 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 SRIP3-201ENST00000413200 219 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 EDDM3CP-201ENST00000415977 425 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 AC004386.2-201ENST00000441858 148 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 AL137159.1-201ENST00000452808 512 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 PRELID3BP1-201ENST00000457142 540 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 RNU7-14P-201ENST00000459331 62 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.67□□□□□ -1.98
CCDC138Q96M89 RNA5SP367-201ENST00000516557 118 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 RNA5SP490-201ENST00000517141 136 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC138Q96M89 AC004584.2-201ENST00000570407 410 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 MIR4446-201ENST00000578505 67 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 MIR5006-201ENST00000583027 110 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 SNORD14A-201ENST00000606526 91 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CCDC138Q96M89 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.67□□□□□ -1.98
CCDC138Q96M89 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC138Q96M89 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC138Q96M89 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CCDC138Q96M89 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CCDC138Q96M89 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC138Q96M89 RNA5SP432-201ENST00000362480 116 ntBASIC2.66□□□□□ -1.98
CCDC138Q96M89 Y_RNA.106-201ENST00000363189 100 ntBASIC2.66□□□□□ -1.98
CCDC138Q96M89 RNU6-99P-201ENST00000364721 107 ntBASIC2.66□□□□□ -1.98
CCDC138Q96M89 RNU6-245P-201ENST00000384020 107 ntBASIC2.66□□□□□ -1.98
CCDC138Q96M89 Y_RNA.509-201ENST00000384506 99 ntBASIC2.66□□□□□ -1.98
CCDC138Q96M89 RNU6-159P-201ENST00000391080 106 ntBASIC2.66□□□□□ -1.98
CCDC138Q96M89 AL138827.1-201ENST00000402666 306 ntBASIC2.66□□□□□ -1.98
CCDC138Q96M89 MTND3P23-201ENST00000431980 347 ntBASIC2.66□□□□□ -1.98
CCDC138Q96M89 AC093259.1-201ENST00000509755 300 ntBASIC2.66□□□□□ -1.98
CCDC138Q96M89 RNU1-104P-201ENST00000517280 175 ntBASIC2.66□□□□□ -1.98
CCDC138Q96M89 DEFB131C-201ENST00000528817 165 ntBASIC2.66□□□□□ -1.98
CCDC138Q96M89 ANP32BP3-201ENST00000559213 706 ntBASIC2.66□□□□□ -1.98
CCDC138Q96M89 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCDC138Q96M89 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC138Q96M89 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.66□□□□□ -1.98
CCDC138Q96M89 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC138Q96M89 ZNF271P-202ENST00000465539 1970 ntBASIC2.65□□□□□ -1.98
CCDC138Q96M89 Y_RNA.61-201ENST00000362835 102 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 RNU6-490P-201ENST00000362985 107 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 RNU6-797P-201ENST00000363101 109 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 RNU5F-3P-201ENST00000363767 117 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 RNU6-280P-201ENST00000364145 104 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 Y_RNA.364-201ENST00000365532 101 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 RNU6-1040P-201ENST00000383974 107 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 Y_RNA.431-201ENST00000384086 102 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 RNA5SP21-201ENST00000410917 96 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 AC092423.1-201ENST00000430165 186 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 AC009237.7-201ENST00000447357 229 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 MTCO3P8-201ENST00000453691 755 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC138Q96M89 AC008549.1-201ENST00000512900 643 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 RNU6-120P-201ENST00000516077 103 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 RNA5SP137-201ENST00000516833 135 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC138Q96M89 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC138Q96M89 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC138Q96M89 AC233702.2-202ENST00000562547 291 ntBASIC2.65□□□□□ -1.99
CCDC138Q96M89 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC138Q96M89 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC138Q96M89 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CCDC138Q96M89 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC138Q96M89 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CCDC138Q96M89 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
CCDC138Q96M89 SNORD31B-201ENST00000364977 69 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 Y_RNA.315-201ENST00000365117 102 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 RNU6-438P-201ENST00000365561 103 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 RNU6-1026P-201ENST00000384465 108 ntBASIC2.64□□□□□ -1.99
CCDC138Q96M89 AF228730.4-201ENST00000421457 183 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms