Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 AC006600.1-201ENST00000572529 153 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 AC006504.6-201ENST00000590142 199 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 AL138963.2-201ENST00000605137 226 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 SNORD58B-201ENST00000607313 66 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 AL132822.1-201ENST00000617063 513 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 AC138305.3-201ENST00000624988 240 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 MIR6733-201ENST00000635723 61 ntBASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.99□□□□□ -1.93
CDK5RAP3Q96JB5 AC069528.2-201ENST00000624849 1991 ntBASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 RNU1-72P-201ENST00000362976 153 ntBASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 RNU6-378P-201ENST00000384324 107 ntBASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 MIR628-201ENST00000385229 95 ntBASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 Y_RNA.592-201ENST00000410274 109 ntBASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 RPS26P42-201ENST00000413485 326 ntBASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 AC114482.1-201ENST00000418010 247 ntBASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 AL590556.1-201ENST00000423231 483 ntBASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 AP000870.1-201ENST00000472927 406 ntBASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 GNAI2P1-201ENST00000541815 315 ntBASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 GTF3AP2-201ENST00000557014 266 ntBASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 U2.1-201ENST00000618978 145 ntBASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDK5RAP3Q96JB5 AC091812.1-201ENST00000432235 1948 ntBASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AC005592.1-201ENST00000566527 1640 ntBASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 RNU6-859P-201ENST00000362728 107 ntBASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 Y_RNA.162-201ENST00000363683 102 ntBASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AC117470.1-201ENST00000381974 330 ntBASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 MIR606-201ENST00000384851 96 ntBASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 RNA5SP201-201ENST00000410316 124 ntBASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 HMGB3P2-201ENST00000411913 584 ntBASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 USP9YP16-201ENST00000430287 407 ntBASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 USP9YP23-201ENST00000455085 407 ntBASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AC090515.1-201ENST00000465295 476 ntBASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AC027288.2-201ENST00000553028 243 ntBASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AC090617.3-201ENST00000573670 475 ntBASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 PCGEM1.1-201ENST00000613431 131 ntBASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AC005520.5-201ENST00000613926 164 ntBASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDK5RAP3Q96JB5 SNORA38-201ENST00000363946 132 ntBASIC2.96□□□□□ -1.94
CDK5RAP3Q96JB5 Y_RNA.557-201ENST00000384680 107 ntBASIC2.96□□□□□ -1.94
CDK5RAP3Q96JB5 MIR549A-201ENST00000385268 96 ntBASIC2.96□□□□□ -1.94
CDK5RAP3Q96JB5 SNORA46.1-201ENST00000391069 153 ntBASIC2.96□□□□□ -1.94
CDK5RAP3Q96JB5 AL445305.1-201ENST00000432577 575 ntBASIC2.96□□□□□ -1.94
CDK5RAP3Q96JB5 U8.22-201ENST00000459141 133 ntBASIC2.96□□□□□ -1.94
CDK5RAP3Q96JB5 RNU6-1198P-201ENST00000516904 67 ntBASIC2.96□□□□□ -1.94
CDK5RAP3Q96JB5 RNU6-58P-201ENST00000517143 103 ntBASIC2.96□□□□□ -1.94
CDK5RAP3Q96JB5 AC091144.1-201ENST00000519573 138 ntBASIC2.96□□□□□ -1.94
CDK5RAP3Q96JB5 EIF4BP1-201ENST00000554881 351 ntBASIC2.96□□□□□ -1.94
CDK5RAP3Q96JB5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.96□□□□□ -1.94
CDK5RAP3Q96JB5 VN1R91P-201ENST00000594377 169 ntBASIC2.96□□□□□ -1.94
CDK5RAP3Q96JB5 AL713866.2-201ENST00000603579 219 ntBASIC2.96□□□□□ -1.94
CDK5RAP3Q96JB5 AL138825.1-201ENST00000618587 192 ntBASIC2.96□□□□□ -1.94
CDK5RAP3Q96JB5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.96□□□□□ -1.94
CDK5RAP3Q96JB5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 Y_RNA.158-201ENST00000363651 101 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 RNA5SP125-201ENST00000364843 120 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 RNA5SP210-201ENST00000391034 120 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 AL356057.3-201ENST00000402607 340 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 SNORD109B-201ENST00000458961 67 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 SNORD109A-201ENST00000459128 67 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 AC096725.1-201ENST00000514266 313 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 RN7SKP132-201ENST00000516001 208 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 RNA5SP76-201ENST00000516277 87 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 SNORA31.15-201ENST00000516771 132 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 HSPE1P18-201ENST00000517602 280 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 EIF4A1P12-201ENST00000551910 141 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 UBL5P4-201ENST00000562584 236 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 MIR5188-201ENST00000583467 113 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 AL360085.1-201ENST00000604713 532 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 FO624990.1-201ENST00000636373 85 ntBASIC2.95□□□□□ -1.94
CDK5RAP3Q96JB5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 U3.9-201ENST00000363823 204 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 Y_RNA.424-201ENST00000384063 103 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 RNU1-138P-201ENST00000384093 164 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 RNU6-1160P-201ENST00000384546 104 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 MIR592-201ENST00000384959 97 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 MIR29B2-201ENST00000385055 81 ntBASIC2.94□□□□□ -1.94
CDK5RAP3Q96JB5 SNORA12-201ENST00000391162 147 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms