| CNRIP1 | Q96F85 | MIR1273D-201 | ENST00000577266 | 86 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CNRIP1 | Q96F85 | AC010928.2-201 | ENST00000588017 | 287 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CNRIP1 | Q96F85 | U4atac.1-201 | ENST00000618345 | 95 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CNRIP1 | Q96F85 | CYLC1-201 | ENST00000329312 | 2106 nt | APPRIS P3 TSL 1 (best) BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | Z82209.1-201 | ENST00000422141 | 2135 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | Y_RNA.48-201 | ENST00000362710 | 103 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | Y_RNA.58-201 | ENST00000362807 | 102 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | Y_RNA.154-201 | ENST00000363624 | 102 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNU6-944P-201 | ENST00000364023 | 107 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNY3P1-201 | ENST00000365085 | 102 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNY3-201 | ENST00000365484 | 102 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | U8.10-201 | ENST00000384260 | 133 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNU6-1072P-201 | ENST00000384703 | 107 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNU6-443P-201 | ENST00000384780 | 107 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AL135786.1-201 | ENST00000415892 | 214 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AL590556.1-201 | ENST00000423231 | 483 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | CBX3P6-201 | ENST00000430257 | 527 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | Z82188.1-201 | ENST00000436709 | 154 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | Y_RNA.675-201 | ENST00000516389 | 149 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AC069133.1-201 | ENST00000522857 | 566 nt | TSL 4 BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AL590705.4-201 | ENST00000532209 | 134 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | EIF4A1P12-201 | ENST00000551910 | 141 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | PWRN1-203 | ENST00000564898 | 389 nt | TSL 5 BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | MIR5194-201 | ENST00000582634 | 120 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RMST_6.1-201 | ENST00000611980 | 203 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AC133104.2-201 | ENST00000615272 | 193 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AC064859.1-201 | ENST00000624741 | 174 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AC090517.3-201 | ENST00000625170 | 141 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | COMMD6-213 | ENST00000626103 | 120 nt | TSL 5 BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | CEP44-203 | ENST00000426172 | 3037 nt | TSL 5 BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | TAB2-205 | ENST00000538427 | 4240 nt | APPRIS P1 TSL 5 BASIC | 1.96 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AKAP7-209 | ENST00000541650 | 2008 nt | TSL 5 BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | SCOC-201 | ENST00000338517 | 1864 nt | TSL 4 BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | GAGE12B-201 | ENST00000361446 | 117 nt | APPRIS P1 BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | U3.9-201 | ENST00000363823 | 204 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | SNORD115-8-201 | ENST00000363856 | 82 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | SNORD115-38-201 | ENST00000365037 | 82 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNU6-890P-201 | ENST00000384121 | 107 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNU6-378P-201 | ENST00000384324 | 107 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | SNORA64-201 | ENST00000384674 | 134 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | MIR23A-201 | ENST00000385245 | 73 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | Y_RNA.597-201 | ENST00000410463 | 100 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RN7SKP223-201 | ENST00000410582 | 62 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNU6-1304P-201 | ENST00000411374 | 106 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | LINC01549-201 | ENST00000440664 | 714 nt | TSL 3 BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | snoU13.6-201 | ENST00000458785 | 104 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | snoU13.30-201 | ENST00000458951 | 104 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AC007215.1-201 | ENST00000464893 | 276 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | CKS1BP2-201 | ENST00000497342 | 240 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | LINC02064-201 | ENST00000506492 | 470 nt | TSL 5 BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AP005436.2-201 | ENST00000528458 | 252 nt | TSL 5 BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | CBX3P7-201 | ENST00000532876 | 502 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | MIR4435-1-201 | ENST00000582552 | 80 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AL049779.4-201 | ENST00000604500 | 156 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AL355297.2-201 | ENST00000604792 | 129 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AC126177.8-201 | ENST00000618339 | 1015 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RMDN2-203 | ENST00000402091 | 1973 nt | TSL 2 BASIC | 1.95 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | ZNF658B-202 | ENST00000615961 | 3375 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | FGF7-202 | ENST00000560270 | 1688 nt | TSL 1 (best) BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | OSTN-201 | ENST00000339051 | 402 nt | APPRIS P1 TSL 1 (best) BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNU6-1159P-201 | ENST00000362933 | 107 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNY1P16-201 | ENST00000363063 | 111 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNU1-23P-201 | ENST00000363361 | 144 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | Y_RNA.187-201 | ENST00000363918 | 113 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNA5SP160-201 | ENST00000364866 | 120 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNU6-17P-201 | ENST00000384245 | 107 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | SNORA67.3-201 | ENST00000384366 | 140 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNU6-18P-201 | ENST00000384527 | 107 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | MIR561-201 | ENST00000385216 | 97 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | TRDJ2-201 | ENST00000390475 | 54 nt | APPRIS P1 BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | SNORA12.2-201 | ENST00000391040 | 156 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | MIR208B-201 | ENST00000401172 | 77 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | BCL2L11-207 | ENST00000405953 | 425 nt | TSL 1 (best) BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNA5SP425-201 | ENST00000410336 | 112 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNA5SP508-201 | ENST00000411327 | 119 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AL139156.1-201 | ENST00000412785 | 841 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | LINC02559-201 | ENST00000420391 | 188 nt | TSL 2 BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | MS4A4E-203 | ENST00000425663 | 350 nt | TSL 1 (best) BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | WARS2P1-201 | ENST00000429678 | 537 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | MTND3P23-201 | ENST00000431980 | 347 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AC091133.1-201 | ENST00000435491 | 483 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AC073325.1-201 | ENST00000443714 | 542 nt | TSL 4 BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AC096638.1-201 | ENST00000444678 | 216 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RPL23AP7-203 | ENST00000449021 | 469 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AL021397.1-201 | ENST00000451806 | 248 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RPL30P15-201 | ENST00000457129 | 321 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | SPAG11B-206 | ENST00000458665 | 444 nt | TSL 5 BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RNU7-26P-201 | ENST00000458980 | 63 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AC025033.1-201 | ENST00000463883 | 194 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | RPL17P19-201 | ENST00000489069 | 552 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | SEMA6A-AS1-204 | ENST00000510682 | 521 nt | TSL 5 BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AC097467.1-201 | ENST00000513660 | 370 nt | TSL 5 BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AP002884.4-201 | ENST00000527589 | 594 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | SUB1P3-201 | ENST00000564581 | 315 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AC015818.4-201 | ENST00000580931 | 353 nt | TSL 5 BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | 7SK.7-201 | ENST00000603504 | 247 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AL133255.1-201 | ENST00000606374 | 441 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | SMAD5-AS1_4.1-201 | ENST00000615561 | 167 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | AC084781.2-201 | ENST00000615568 | 161 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CNRIP1 | Q96F85 | KPNA5-202 | ENST00000368564 | 11311 nt | APPRIS P1 TSL 1 (best) BASIC | 1.93 | □□□□□ -2.1 | | |