Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC016925.1-201ENST00000458303 298 ntBASIC2.27□□□□□ -2.05
SKA1Q96BD8 RNU2-44P-201ENST00000516795 194 ntBASIC2.27□□□□□ -2.05
SKA1Q96BD8 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.27□□□□□ -2.05
SKA1Q96BD8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.27□□□□□ -2.05
SKA1Q96BD8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.27□□□□□ -2.05
SKA1Q96BD8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
SKA1Q96BD8 MIR300-201ENST00000401138 83 ntBASIC2.26□□□□□ -2.05
SKA1Q96BD8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.26□□□□□ -2.05
SKA1Q96BD8 AC087477.1-201ENST00000465747 340 ntBASIC2.26□□□□□ -2.05
SKA1Q96BD8 RPL23AP42-201ENST00000471152 471 ntBASIC2.26□□□□□ -2.05
SKA1Q96BD8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.26□□□□□ -2.05
SKA1Q96BD8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.26□□□□□ -2.05
SKA1Q96BD8 ACA59.1-201ENST00000515966 143 ntBASIC2.26□□□□□ -2.05
SKA1Q96BD8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.26□□□□□ -2.05
SKA1Q96BD8 MIR3672-201ENST00000584290 82 ntBASIC2.26□□□□□ -2.05
SKA1Q96BD8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.26□□□□□ -2.05
SKA1Q96BD8 AC090517.2-201ENST00000614966 680 ntBASIC2.26□□□□□ -2.05
SKA1Q96BD8 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.26□□□□□ -2.05
SKA1Q96BD8 AC090617.10-201ENST00000624308 134 ntBASIC2.26□□□□□ -2.05
SKA1Q96BD8 MIR3688-2-201ENST00000636963 87 ntBASIC2.26□□□□□ -2.05
SKA1Q96BD8 AC100810.6-201ENST00000638068 285 ntBASIC2.26□□□□□ -2.05
SKA1Q96BD8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.26□□□□□ -2.05
SKA1Q96BD8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SKA1Q96BD8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.25□□□□□ -2.05
SKA1Q96BD8 KPNA2P1-201ENST00000458289 1591 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SKA1Q96BD8 Y_RNA.135-201ENST00000363439 95 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 RNU6-1013P-201ENST00000384180 107 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 SNORD115-47-201ENST00000391226 86 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 SNORA11.4-201ENST00000408823 129 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 AL590632.1-201ENST00000424289 371 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 AL513185.2-201ENST00000425543 193 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 MTND1P11-201ENST00000456661 876 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 AC130509.1-201ENST00000464158 433 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 MTCYBP18-201ENST00000501056 747 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 RNU6-1314P-201ENST00000517139 104 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 MIR4769-201ENST00000584126 77 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 AP003465.2-201ENST00000602571 373 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 AC016727.2-201ENST00000603988 621 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 AP000907.4-201ENST00000604143 237 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 SNRPGP20-201ENST00000604477 205 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 AC019193.3-201ENST00000609144 554 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 TCL6_2.1-201ENST00000615162 119 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.25□□□□□ -2.05
SKA1Q96BD8 MIR219B-201ENST00000637023 88 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 MIR3662-201ENST00000637030 95 ntBASIC2.25□□□□□ -2.05
SKA1Q96BD8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.25□□□□□ -2.05
SKA1Q96BD8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.25□□□□□ -2.05
SKA1Q96BD8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SKA1Q96BD8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.24□□□□□ -2.05
SKA1Q96BD8 Y_RNA.212-201ENST00000364177 102 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 RNA5SP37-201ENST00000365420 130 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 SNORD116-11-201ENST00000383882 92 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 MIR517A-201ENST00000385001 87 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 Z82205.1-201ENST00000428456 297 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 C8orf59P1-201ENST00000429930 303 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.24□□□□□ -2.05
SKA1Q96BD8 RPS15AP28-201ENST00000435088 386 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 AC004386.2-201ENST00000441858 148 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.24□□□□□ -2.05
SKA1Q96BD8 AF186996.7-201ENST00000492781 209 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.24□□□□□ -2.05
SKA1Q96BD8 MTCO2P30-201ENST00000503662 364 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 AC108210.2-201ENST00000503681 201 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 SUMO2P18-201ENST00000518873 252 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.24□□□□□ -2.05
SKA1Q96BD8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.24□□□□□ -2.05
SKA1Q96BD8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.24□□□□□ -2.05
SKA1Q96BD8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.24□□□□□ -2.05
SKA1Q96BD8 MIR4713-201ENST00000582691 75 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 MIR5006-201ENST00000583027 110 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 MIR4448-201ENST00000584360 86 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 AC002984.1-201ENST00000591692 448 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 AC093913.1-201ENST00000614178 329 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 MIR6766-201ENST00000622641 72 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 AC139792.2-201ENST00000624218 587 ntBASIC2.24□□□□□ -2.05
SKA1Q96BD8 SNORA12.2-201ENST00000391040 156 ntBASIC2.23□□□□□ -2.05
SKA1Q96BD8 RNA5SP338-201ENST00000410495 85 ntBASIC2.23□□□□□ -2.05
SKA1Q96BD8 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SKA1Q96BD8 MTND4LP16-201ENST00000440828 295 ntBASIC2.23□□□□□ -2.05
SKA1Q96BD8 AC007215.1-201ENST00000464893 276 ntBASIC2.23□□□□□ -2.05
SKA1Q96BD8 RPL23AP75-201ENST00000491601 451 ntBASIC2.23□□□□□ -2.05
SKA1Q96BD8 MIR4753-201ENST00000585119 83 ntBASIC2.23□□□□□ -2.05
SKA1Q96BD8 AC124303.1-201ENST00000605703 360 ntBASIC2.23□□□□□ -2.05
SKA1Q96BD8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.23□□□□□ -2.05
SKA1Q96BD8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.23□□□□□ -2.05
SKA1Q96BD8 AC245060.5-201ENST00000610778 3293 ntBASIC2.23□□□□□ -2.05
SKA1Q96BD8 MTND5P6-201ENST00000422338 1798 ntBASIC2.23□□□□□ -2.05
SKA1Q96BD8 MTND4P5-201ENST00000435821 1374 ntBASIC2.23□□□□□ -2.05
SKA1Q96BD8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.23□□□□□ -2.05
SKA1Q96BD8 MTND4P1-201ENST00000457501 1466 ntBASIC2.22□□□□□ -2.05
SKA1Q96BD8 MIR221-201ENST00000385135 110 ntBASIC2.22□□□□□ -2.05
SKA1Q96BD8 RNU2-40P-201ENST00000410833 196 ntBASIC2.22□□□□□ -2.05
SKA1Q96BD8 AC009310.1-201ENST00000414414 451 ntBASIC2.22□□□□□ -2.05
SKA1Q96BD8 NCOR1P3-201ENST00000420479 303 ntBASIC2.22□□□□□ -2.05
SKA1Q96BD8 UBE2V1P8-201ENST00000437166 265 ntBASIC2.22□□□□□ -2.05
SKA1Q96BD8 AC018634.1-201ENST00000437554 401 ntBASIC2.22□□□□□ -2.05
SKA1Q96BD8 RNU6-717P-201ENST00000459076 104 ntBASIC2.22□□□□□ -2.05
SKA1Q96BD8 RNA5SP200-201ENST00000516360 103 ntBASIC2.22□□□□□ -2.05
SKA1Q96BD8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms