Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 AP005660.1-201ENST00000522972 293 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.7□□□□□ -2.14
LHX4Q969G2 DEFB131C-201ENST00000528817 165 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 ANP32BP3-201ENST00000559213 706 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.7□□□□□ -2.14
LHX4Q969G2 MIR3935-201ENST00000583472 104 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 MIR5002-201ENST00000584713 97 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.7□□□□□ -2.14
LHX4Q969G2 AL158827.2-201ENST00000602494 330 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 AC068790.6-201ENST00000602558 258 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.7□□□□□ -2.14
LHX4Q969G2 AL022345.1-201ENST00000607292 135 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 U1.36-201ENST00000620684 176 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 AC009033.1-201ENST00000624279 431 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 AL691447.3-201ENST00000635020 330 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 AC100810.6-201ENST00000638068 285 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.7□□□□□ -2.14
LHX4Q969G2 LINC02555-201ENST00000563933 1951 ntBASIC1.7□□□□□ -2.14
LHX4Q969G2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
LHX4Q969G2 SNORD50.1-201ENST00000362987 71 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 RNU6-23P-201ENST00000363283 107 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 SNORD114-6-201ENST00000364393 72 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 RNU6-790P-201ENST00000384479 105 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 MIR1277-201ENST00000408536 78 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.69□□□□□ -2.14
LHX4Q969G2 DAP3P1-201ENST00000441522 278 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.69□□□□□ -2.14
LHX4Q969G2 PCMTD1P1-201ENST00000455560 355 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 AC130509.1-201ENST00000464158 433 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.69□□□□□ -2.14
LHX4Q969G2 RNU6-864P-201ENST00000516256 108 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 RNU5F-4P-201ENST00000516581 114 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.69□□□□□ -2.14
LHX4Q969G2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.69□□□□□ -2.14
LHX4Q969G2 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.69□□□□□ -2.14
LHX4Q969G2 MIR3169-201ENST00000578032 83 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.69□□□□□ -2.14
LHX4Q969G2 Y_RNA.783-201ENST00000613546 102 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 AL590240.4-201ENST00000616908 390 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 uc_338.20-201ENST00000621563 178 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 DUXAP9-208ENST00000622815 614 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 AC130454.1-201ENST00000622948 401 ntBASIC1.69□□□□□ -2.14
LHX4Q969G2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
LHX4Q969G2 MIR340-201ENST00000362125 95 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 RNA5SP493-201ENST00000364115 91 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 SNORD31B-201ENST00000364977 69 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
LHX4Q969G2 SNORA18.2-201ENST00000383865 132 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 SNORD116-11-201ENST00000383882 92 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 RNU6-831P-201ENST00000384548 107 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 MIR517A-201ENST00000385001 87 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
LHX4Q969G2 SNORA12.2-201ENST00000391040 156 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 AL079342.1-201ENST00000401460 267 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.68□□□□□ -2.14
LHX4Q969G2 MTND1P4-201ENST00000435196 415 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.68□□□□□ -2.14
LHX4Q969G2 AL035666.1-201ENST00000446195 348 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 AC079354.2-201ENST00000453523 154 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.68□□□□□ -2.14
LHX4Q969G2 AC016925.1-201ENST00000458303 298 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 RNU7-14P-201ENST00000459331 62 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 UBL5P3-201ENST00000475112 231 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.68□□□□□ -2.14
LHX4Q969G2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.68□□□□□ -2.14
LHX4Q969G2 MIR4713-201ENST00000582691 75 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 AC016727.2-201ENST00000603988 621 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 AC006504.8-201ENST00000621046 635 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 AC092881.1-201ENST00000638218 2733 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 AC233981.2-201ENST00000611524 1614 ntBASIC1.68□□□□□ -2.14
LHX4Q969G2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
LHX4Q969G2 RNU6-438P-201ENST00000365561 103 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 MIR504-201ENST00000385065 83 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 RNU6-192P-201ENST00000391253 100 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 RNA5SP489-201ENST00000410986 109 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 RNA5SP501-201ENST00000410990 112 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 FCF1P9-201ENST00000412546 282 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 EIF1P1-201ENST00000421436 341 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 Z82205.1-201ENST00000428456 297 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 AL445646.1-201ENST00000431784 216 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 AL353572.1-201ENST00000442490 417 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 SNRPEP8-201ENST00000442866 260 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 OR2AQ1P-201ENST00000451972 200 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 RNU1-131P-201ENST00000458943 161 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 RN7SL274P-201ENST00000492268 272 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 RPS23P5-201ENST00000495419 428 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 MTCO2P30-201ENST00000503662 364 ntBASIC1.67□□□□□ -2.14
LHX4Q969G2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.67□□□□□ -2.14
LHX4Q969G2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.67□□□□□ -2.14
LHX4Q969G2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.67□□□□□ -2.14
LHX4Q969G2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
LHX4Q969G2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.67□□□□□ -2.14
LHX4Q969G2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.67□□□□□ -2.14
LHX4Q969G2 MIR3124-201ENST00000582636 67 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 162 ms