Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNU4-56P-201ENST00000364700 142 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 Y_RNA.446-201ENST00000384178 104 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 U3.26-201ENST00000391236 204 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 RNU6-1077P-201ENST00000410506 102 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 RNU6-1140P-201ENST00000410517 106 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 RPL23AP36-201ENST00000413895 458 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 BX510359.1-201ENST00000456973 237 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 SNORA25.14-201ENST00000516481 132 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 SNORA31.21-201ENST00000517180 77 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 MIR5004-201ENST00000579078 107 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 MIR3923-201ENST00000579521 83 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 AC005176.2-201ENST00000596933 147 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 AC008749.1-201ENST00000597650 306 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 AL162424.1-201ENST00000602325 221 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 AC022441.3-201ENST00000605737 136 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.6□□□□□ -1.83
BRF1Q92994 AL590240.4-201ENST00000616908 390 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 U6.98-201ENST00000637157 84 ntBASIC3.6□□□□□ -1.83
BRF1Q92994 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.6□□□□□ -1.83
BRF1Q92994 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
BRF1Q92994 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.6□□□□□ -1.83
BRF1Q92994 GABRG2-229ENST00000641017 3628 ntBASIC3.59□□□□□ -1.83
BRF1Q92994 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
BRF1Q92994 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
BRF1Q92994 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
BRF1Q92994 MIR410-201ENST00000362222 80 ntBASIC3.59□□□□□ -1.83
BRF1Q92994 SNORA25.1-201ENST00000362326 128 ntBASIC3.59□□□□□ -1.83
BRF1Q92994 Y_RNA.275-201ENST00000364726 110 ntBASIC3.59□□□□□ -1.83
BRF1Q92994 RNU6-793P-201ENST00000384233 104 ntBASIC3.59□□□□□ -1.83
BRF1Q92994 SNORA54-201ENST00000384281 123 ntBASIC3.59□□□□□ -1.83
BRF1Q92994 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.59□□□□□ -1.83
BRF1Q92994 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.59□□□□□ -1.83
BRF1Q92994 AC138623.1-201ENST00000418060 216 ntBASIC3.59□□□□□ -1.83
BRF1Q92994 AL365496.1-201ENST00000426885 215 ntBASIC3.59□□□□□ -1.83
BRF1Q92994 MTND2P29-201ENST00000438595 412 ntBASIC3.59□□□□□ -1.83
BRF1Q92994 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.59□□□□□ -1.83
BRF1Q92994 RN7SL807P-201ENST00000470923 297 ntBASIC3.59□□□□□ -1.83
BRF1Q92994 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.59□□□□□ -1.83
BRF1Q92994 AC025281.1-201ENST00000567026 265 ntBASIC3.59□□□□□ -1.83
BRF1Q92994 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.59□□□□□ -1.83
BRF1Q92994 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.59□□□□□ -1.83
BRF1Q92994 MIR4282-201ENST00000583613 67 ntBASIC3.59□□□□□ -1.83
BRF1Q92994 YPEL5P2-201ENST00000605553 359 ntBASIC3.59□□□□□ -1.83
BRF1Q92994 MIR622-201ENST00000638396 96 ntBASIC3.59□□□□□ -1.83
BRF1Q92994 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
BRF1Q92994 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BRF1Q92994 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
BRF1Q92994 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
BRF1Q92994 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
BRF1Q92994 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
BRF1Q92994 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.58□□□□□ -1.84
BRF1Q92994 AC099654.7-201ENST00000635788 2127 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 MIR411-201ENST00000362239 96 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 RNU1-62P-201ENST00000362599 164 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 Y_RNA.122-201ENST00000363331 96 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 RNU6-529P-201ENST00000363383 104 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 Y_RNA.270-201ENST00000364693 104 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 RNU6-740P-201ENST00000364734 105 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 RNY4P28-201ENST00000365281 93 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.58□□□□□ -1.84
BRF1Q92994 RNU6-886P-201ENST00000384319 105 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 RNU2-49P-201ENST00000410666 184 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 Y_RNA.793-201ENST00000411222 111 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 RNU4-61P-201ENST00000411243 107 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.58□□□□□ -1.84
BRF1Q92994 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.58□□□□□ -1.84
BRF1Q92994 MTCO1P5-201ENST00000433573 344 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 AC104332.1-201ENST00000440471 797 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 AC006445.1-201ENST00000491925 405 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.58□□□□□ -1.84
BRF1Q92994 AC093331.1-201ENST00000521474 169 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 MZT1P2-201ENST00000604387 248 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 AL034555.1-201ENST00000604816 211 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 AC007318.2-201ENST00000620999 243 ntBASIC3.58□□□□□ -1.84
BRF1Q92994 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
BRF1Q92994 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
BRF1Q92994 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
BRF1Q92994 Y_RNA.82-201ENST00000363000 102 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 Y_RNA.92-201ENST00000363043 102 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 Y_RNA.235-201ENST00000364412 102 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 Y_RNA.306-201ENST00000365015 102 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 Y_RNA.312-201ENST00000365089 102 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 Y_RNA.322-201ENST00000365151 102 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 Y_RNA.331-201ENST00000365267 102 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 RNA5SP252-201ENST00000391131 119 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 MIR208B-201ENST00000401172 77 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 CBX3P9-201ENST00000402326 552 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 MIR320B2-201ENST00000408479 138 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 Y_RNA.650-201ENST00000459002 102 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 RNU7-120P-201ENST00000459334 63 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.57□□□□□ -1.84
BRF1Q92994 SNORA27.4-201ENST00000516650 95 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 Y_RNA.777-201ENST00000516982 102 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 AC018448.1-201ENST00000552843 316 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 Y_RNA.771-201ENST00000598668 102 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 AC006001.4-201ENST00000622243 395 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 Y_RNA.789-201ENST00000622480 102 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 IGHVIII-44-202ENST00000636235 289 ntBASIC3.57□□□□□ -1.84
BRF1Q92994 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
BRF1Q92994 AC091152.2-201ENST00000591628 2569 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms