Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
RTF1Q92541 RNU6-1010P-201ENST00000362757 107 ntBASIC3.38□□□□□ -1.87
RTF1Q92541 MIR147B-201ENST00000390185 80 ntBASIC3.38□□□□□ -1.87
RTF1Q92541 RNU1-139P-201ENST00000391307 165 ntBASIC3.38□□□□□ -1.87
RTF1Q92541 AC004383.1-201ENST00000438135 289 ntBASIC3.38□□□□□ -1.87
RTF1Q92541 AL513328.1-201ENST00000446460 224 ntBASIC3.38□□□□□ -1.87
RTF1Q92541 AC103975.1-201ENST00000482506 483 ntBASIC3.38□□□□□ -1.87
RTF1Q92541 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.38□□□□□ -1.87
RTF1Q92541 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.38□□□□□ -1.87
RTF1Q92541 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.38□□□□□ -1.87
RTF1Q92541 AC105137.2-201ENST00000569073 466 ntBASIC3.38□□□□□ -1.87
RTF1Q92541 RPS15AP11-201ENST00000594193 385 ntBASIC3.38□□□□□ -1.87
RTF1Q92541 RAC1P9-201ENST00000604990 392 ntBASIC3.38□□□□□ -1.87
RTF1Q92541 AC107871.2-201ENST00000612894 502 ntBASIC3.38□□□□□ -1.87
RTF1Q92541 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.38□□□□□ -1.87
RTF1Q92541 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.38□□□□□ -1.87
RTF1Q92541 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.38□□□□□ -1.87
RTF1Q92541 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.38□□□□□ -1.87
RTF1Q92541 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.38□□□□□ -1.87
RTF1Q92541 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.38□□□□□ -1.87
RTF1Q92541 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.37□□□□□ -1.87
RTF1Q92541 RNU1-105P-201ENST00000363470 161 ntBASIC3.37□□□□□ -1.87
RTF1Q92541 Y_RNA.214-201ENST00000364201 112 ntBASIC3.37□□□□□ -1.87
RTF1Q92541 RNU6-26P-201ENST00000383985 107 ntBASIC3.37□□□□□ -1.87
RTF1Q92541 RNU6-611P-201ENST00000384276 104 ntBASIC3.37□□□□□ -1.87
RTF1Q92541 Y_RNA.471-201ENST00000384312 102 ntBASIC3.37□□□□□ -1.87
RTF1Q92541 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.37□□□□□ -1.87
RTF1Q92541 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.37□□□□□ -1.87
RTF1Q92541 SDAD1P3-201ENST00000427380 333 ntBASIC3.37□□□□□ -1.87
RTF1Q92541 USP9YP16-201ENST00000430287 407 ntBASIC3.37□□□□□ -1.87
RTF1Q92541 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.37□□□□□ -1.87
RTF1Q92541 USP9YP23-201ENST00000455085 407 ntBASIC3.37□□□□□ -1.87
RTF1Q92541 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.37□□□□□ -1.87
RTF1Q92541 SRIP1-201ENST00000489235 288 ntBASIC3.37□□□□□ -1.87
RTF1Q92541 RNU6-1198P-201ENST00000516904 67 ntBASIC3.37□□□□□ -1.87
RTF1Q92541 RNU6-56P-201ENST00000516986 93 ntBASIC3.37□□□□□ -1.87
RTF1Q92541 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.37□□□□□ -1.87
RTF1Q92541 AC090517.1-201ENST00000569307 266 ntBASIC3.37□□□□□ -1.87
RTF1Q92541 MYL12BP1-201ENST00000569826 507 ntBASIC3.37□□□□□ -1.87
RTF1Q92541 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.37□□□□□ -1.87
RTF1Q92541 MAPK10-266ENST00000641066 6555 ntBASIC3.37□□□□□ -1.87
RTF1Q92541 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTF1Q92541 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTF1Q92541 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTF1Q92541 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RTF1Q92541 RNU6-1159P-201ENST00000362933 107 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 RNU6-708P-201ENST00000384217 107 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 U8.10-201ENST00000384260 133 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 MIR27B-201ENST00000385129 97 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 Y_RNA.618-201ENST00000410949 107 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 RPS26P42-201ENST00000413485 326 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 RPEP5-201ENST00000441137 268 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 DYNLT3P2-201ENST00000442517 295 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 EEF1B2P7-201ENST00000451177 676 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 U8.22-201ENST00000459141 133 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.36□□□□□ -1.87
RTF1Q92541 GZMAP1-201ENST00000503054 631 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 RNU6-1114P-201ENST00000516022 107 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 RNU6-567P-201ENST00000516746 107 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 AC007536.1-201ENST00000533382 349 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 HSPE1P20-201ENST00000538133 289 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 MIR3136-201ENST00000583498 78 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 MIR8062-201ENST00000621515 85 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTF1Q92541 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTF1Q92541 MAPK10-322ENST00000641485 4530 ntBASIC3.36□□□□□ -1.87
RTF1Q92541 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.35□□□□□ -1.87
RTF1Q92541 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
RTF1Q92541 SNORD115-8-201ENST00000363856 82 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 SNORD115-38-201ENST00000365037 82 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 SNORA36A-201ENST00000384221 132 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 RNU6-713P-201ENST00000384761 107 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 MT-TG-201ENST00000387429 68 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 ELOCP20-201ENST00000422460 345 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 AC012306.1-201ENST00000423267 114 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 EIF1P2-201ENST00000428233 350 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.35□□□□□ -1.87
RTF1Q92541 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.35□□□□□ -1.87
RTF1Q92541 snoU13.14-201ENST00000459372 104 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 RN7SL499P-201ENST00000481141 276 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 AC067942.3-201ENST00000512025 362 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 RNA5SP320-201ENST00000516263 124 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 SNORA40.15-201ENST00000516884 107 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 Y_RNA.713-201ENST00000517013 96 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 RNU6-897P-201ENST00000517135 105 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 AC027288.2-201ENST00000553028 243 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.35□□□□□ -1.87
RTF1Q92541 MIR4435-1-201ENST00000582552 80 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 AL138963.2-201ENST00000605137 226 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 uc_338.14-201ENST00000613162 166 ntBASIC3.35□□□□□ -1.87
RTF1Q92541 RNU6-222P-201ENST00000362438 107 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 RNU6-1301P-201ENST00000362724 104 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 SNORD114-19-201ENST00000363072 75 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 Y_RNA.183-201ENST00000363882 113 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 RNU6-770P-201ENST00000363929 105 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 RNA5SP126-201ENST00000365092 109 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 Y_RNA.319-201ENST00000365138 92 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 Y_RNA.458-201ENST00000384240 102 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 RNU6-541P-201ENST00000384709 110 ntBASIC3.34□□□□□ -1.87
RTF1Q92541 MIR767-201ENST00000390228 109 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms