Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-3Q8TAU0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.65
NKX2-3Q8TAU0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 Y_RNA.52-201ENST00000362760 96 ntBASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 RNA5SP399-201ENST00000364003 117 ntBASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 RNU6-1279P-201ENST00000383917 103 ntBASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 RNU1-73P-201ENST00000383971 164 ntBASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 AL139281.1-201ENST00000422120 335 ntBASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 AC078817.1-201ENST00000492623 435 ntBASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 AC078918.1-201ENST00000498515 228 ntBASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 Vault.1-201ENST00000516474 102 ntBASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 RNU7-116P-201ENST00000516940 62 ntBASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 IGKV2D-19-201ENST00000523346 262 ntBASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 AC090897.2-201ENST00000581715 130 ntBASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 TCL6_2.1-201ENST00000615162 119 ntBASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
NKX2-3Q8TAU0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 AL159152.1-201ENST00000635019 2587 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 MIR494-201ENST00000349529 81 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 Y_RNA.78-201ENST00000362970 110 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 U3.8-201ENST00000363675 217 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 RNU6-1124P-201ENST00000384169 107 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 RNU6-622P-201ENST00000384272 103 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 MIR518C-201ENST00000384822 101 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 MIR624-201ENST00000385217 97 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 CBX3P9-201ENST00000402326 552 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 RNA5SP225-201ENST00000410874 135 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 Z92545.1-201ENST00000411782 234 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 RPL37P4-201ENST00000448908 268 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 RNU6-437P-201ENST00000459408 95 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 RPS26P28-201ENST00000470806 348 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 RPL36AP21-201ENST00000490372 323 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 COX6CP6-201ENST00000490840 228 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 FTX_3.1-201ENST00000610451 147 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 MALAT1.1-201ENST00000618249 95 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 SNORD98-201ENST00000636377 67 ntBASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.76□□□□□ -1.65
NKX2-3Q8TAU0 AL589743.1-201ENST00000551932 2712 ntBASIC4.75□□□□□ -1.65
NKX2-3Q8TAU0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
NKX2-3Q8TAU0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
NKX2-3Q8TAU0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.75□□□□□ -1.65
NKX2-3Q8TAU0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NKX2-3Q8TAU0 AC004866.1-201ENST00000411748 78 ntBASIC4.75□□□□□ -1.65
NKX2-3Q8TAU0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-3Q8TAU0 SNORA70.16-201ENST00000516390 95 ntBASIC4.75□□□□□ -1.65
NKX2-3Q8TAU0 AC026421.1-201ENST00000519101 163 ntBASIC4.75□□□□□ -1.65
NKX2-3Q8TAU0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.75□□□□□ -1.65
NKX2-3Q8TAU0 AC092435.4-201ENST00000623012 4159 ntBASIC4.75□□□□□ -1.65
NKX2-3Q8TAU0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX2-3Q8TAU0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 AC068254.2-201ENST00000623938 3577 ntBASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 RNU1-75P-201ENST00000347264 129 ntBASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 RNU6-1296P-201ENST00000383879 107 ntBASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 CYCSP48-201ENST00000417124 323 ntBASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 CALM2P4-201ENST00000430810 426 ntBASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 AC023141.12-201ENST00000512399 199 ntBASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 MIR5195-201ENST00000583555 115 ntBASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 POLR3GP1-201ENST00000594073 261 ntBASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 AC005562.2-201ENST00000618264 111 ntBASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 AL590808.1-201ENST00000618696 141 ntBASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 AC002543.1-201ENST00000299783 1954 ntBASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-3Q8TAU0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 RNU1-108P-201ENST00000362556 161 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 SNORD35B-201ENST00000363660 87 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms