Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC145146.1-201ENST00000496370 254 ntBASIC2.44□□□□□ -2.02
BEST2Q8NFU1 CKS1BP2-201ENST00000497342 240 ntBASIC2.44□□□□□ -2.02
BEST2Q8NFU1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.44□□□□□ -2.02
BEST2Q8NFU1 AC093303.1-201ENST00000514549 295 ntBASIC2.44□□□□□ -2.02
BEST2Q8NFU1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.44□□□□□ -2.02
BEST2Q8NFU1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.44□□□□□ -2.02
BEST2Q8NFU1 AC080078.3-201ENST00000605407 463 ntBASIC2.44□□□□□ -2.02
BEST2Q8NFU1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.44□□□□□ -2.02
BEST2Q8NFU1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.44□□□□□ -2.02
BEST2Q8NFU1 MIR6873-201ENST00000622788 63 ntBASIC2.44□□□□□ -2.02
BEST2Q8NFU1 SCARNA4-201ENST00000629045 128 ntBASIC2.44□□□□□ -2.02
BEST2Q8NFU1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.44□□□□□ -2.02
BEST2Q8NFU1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.44□□□□□ -2.02
BEST2Q8NFU1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
BEST2Q8NFU1 AC092881.1-201ENST00000638218 2733 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
BEST2Q8NFU1 RNY1P16-201ENST00000363063 111 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 Y_RNA.146-201ENST00000363549 102 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 Y_RNA.187-201ENST00000363918 113 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 RNU4-9P-201ENST00000364951 139 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 RNU1-138P-201ENST00000384093 164 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 Y_RNA.460-201ENST00000384255 102 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 HMGB3P2-201ENST00000411913 584 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 MTCO3P29-201ENST00000432119 779 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.43□□□□□ -2.02
BEST2Q8NFU1 HMGN1P13-201ENST00000505795 138 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 AC022493.2-201ENST00000506122 481 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 RNU6-567P-201ENST00000516746 107 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.43□□□□□ -2.02
BEST2Q8NFU1 IGKV3-31-201ENST00000523109 329 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.43□□□□□ -2.02
BEST2Q8NFU1 AL590705.4-201ENST00000532209 134 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 CYP4A27P-201ENST00000567218 190 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 MIR3923-201ENST00000579521 83 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 MIR3124-201ENST00000582636 67 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 AC010928.2-201ENST00000588017 287 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
BEST2Q8NFU1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.43□□□□□ -2.02
BEST2Q8NFU1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 MIR5739-201ENST00000619803 80 ntBASIC2.43□□□□□ -2.02
BEST2Q8NFU1 MTND5P10-201ENST00000603719 1809 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.42□□□□□ -2.02
BEST2Q8NFU1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
BEST2Q8NFU1 AC073544.1-201ENST00000600110 1595 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 Y_RNA.431-201ENST00000384086 102 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 RNU6-1274P-201ENST00000384557 107 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 SNORA80E-201ENST00000384744 137 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 MIR221-201ENST00000385135 110 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 MIR208B-201ENST00000401172 77 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
BEST2Q8NFU1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.42□□□□□ -2.02
BEST2Q8NFU1 AL590556.1-201ENST00000423231 483 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 AC096638.1-201ENST00000444678 216 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.42□□□□□ -2.02
BEST2Q8NFU1 AC027575.1-201ENST00000481064 460 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 RPL30P10-201ENST00000488148 337 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 AC068781.1-201ENST00000488231 618 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.42□□□□□ -2.02
BEST2Q8NFU1 RNU6-586P-201ENST00000517265 104 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 RNU1-104P-201ENST00000517280 175 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 AC104984.5-201ENST00000586878 94 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.42□□□□□ -2.02
BEST2Q8NFU1 7SK.7-201ENST00000603504 247 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 AL138963.2-201ENST00000605137 226 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 AL137847.3-201ENST00000611521 109 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 AL160413.1-201ENST00000622780 310 ntBASIC2.42□□□□□ -2.02
BEST2Q8NFU1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.42□□□□□ -2.02
BEST2Q8NFU1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
BEST2Q8NFU1 Z82209.1-201ENST00000422141 2135 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 RNA5SP125-201ENST00000364843 120 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 Y_RNA.315-201ENST00000365117 102 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 RNU6-1040P-201ENST00000383974 107 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 RNU6-378P-201ENST00000384324 107 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 MIR32-201ENST00000384965 70 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 MIR487A-201ENST00000385009 80 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 MIR29B2-201ENST00000385055 81 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 SNORA12-201ENST00000391162 147 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 AL079342.1-201ENST00000401460 267 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.41□□□□□ -2.02
BEST2Q8NFU1 snoU13.30-201ENST00000458951 104 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 RN7SKP210-201ENST00000459176 261 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 snoU13.26-201ENST00000459452 105 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 RPL17P19-201ENST00000489069 552 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 AC090096.1-201ENST00000489168 390 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.41□□□□□ -2.02
BEST2Q8NFU1 RNU6-470P-201ENST00000515954 104 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 RNU6-264P-201ENST00000517134 104 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.41□□□□□ -2.02
BEST2Q8NFU1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.41□□□□□ -2.02
BEST2Q8NFU1 MIR6715A-201ENST00000615929 79 ntBASIC2.41□□□□□ -2.02
BEST2Q8NFU1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.41□□□□□ -2.02
BEST2Q8NFU1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
BEST2Q8NFU1 Y_RNA.11-201ENST00000362375 109 ntBASIC2.4□□□□□ -2.03
BEST2Q8NFU1 RNU6-944P-201ENST00000364023 107 ntBASIC2.4□□□□□ -2.03
BEST2Q8NFU1 Y_RNA.394-201ENST00000383942 103 ntBASIC2.4□□□□□ -2.03
BEST2Q8NFU1 Y_RNA.405-201ENST00000383979 100 ntBASIC2.4□□□□□ -2.03
BEST2Q8NFU1 Y_RNA.451-201ENST00000384200 100 ntBASIC2.4□□□□□ -2.03
BEST2Q8NFU1 Y_RNA.524-201ENST00000384564 100 ntBASIC2.4□□□□□ -2.03
BEST2Q8NFU1 Y_RNA.561-201ENST00000384694 100 ntBASIC2.4□□□□□ -2.03
BEST2Q8NFU1 MIR144-201ENST00000384886 86 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms