Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 AL133373.1-201ENST00000497098 94 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 AC091874.1-201ENST00000511402 339 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 AL512310.8-201ENST00000550183 120 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 AC090616.2-202ENST00000584248 222 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 Z84480.1-201ENST00000605131 311 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 CTHRC1P1-201ENST00000605383 469 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 AC040896.1-201ENST00000613819 479 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 AC126177.8-201ENST00000618339 1015 ntBASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.86□□□□□ -2.27
ZIC4Q8N9L1 Y_RNA.4-201ENST00000362333 112 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 RNU6-562P-201ENST00000362731 107 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 SNORD114-27-201ENST00000363766 70 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 SNORA36A-201ENST00000384221 132 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 RNU6-1127P-201ENST00000384580 107 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 SNORA16.2-201ENST00000390991 127 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 RNU6-1093P-201ENST00000391194 107 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 HMGN1P14-201ENST00000412459 517 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 AC090960.1-201ENST00000421072 306 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 AC060773.1-201ENST00000421698 310 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 AL033528.1-201ENST00000453780 140 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 RNA5SP384-201ENST00000516615 116 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 RN7SKP88-201ENST00000516847 250 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 RNA5SP102-201ENST00000516865 106 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 MIR4753-201ENST00000585119 83 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 AC245884.10-201ENST00000597355 337 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 NIFKP6-201ENST00000598115 845 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 AC245014.2-201ENST00000603689 287 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 AC246785.4-201ENST00000605374 287 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 AL365434.2-201ENST00000607979 234 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 7SK.8-201ENST00000612110 250 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 7SK.11-201ENST00000615477 250 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 7SK.13-201ENST00000622040 250 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 AC009033.1-201ENST00000624279 431 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 AL603839.4-201ENST00000624658 1005 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 MIR6767-201ENST00000637302 66 ntBASIC0.85□□□□□ -2.27
ZIC4Q8N9L1 BX322639.1-202ENST00000423987 2213 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 RNU6-545P-201ENST00000362681 104 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 SNORA18.2-201ENST00000383865 132 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 RNU6-418P-201ENST00000384035 107 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 Y_RNA.560-201ENST00000384689 102 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 MIR515-2-201ENST00000384883 83 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 MIR515-1-201ENST00000384884 83 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 SNORA40.3-201ENST00000390964 122 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 MIR1283-1-201ENST00000408494 87 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 SCARNA18-201ENST00000459004 134 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 OR2A41P-201ENST00000473586 105 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 RPS23P4-201ENST00000487908 423 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 AC091435.1-201ENST00000505442 584 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 AC010486.2-201ENST00000505572 483 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 MTCO3P23-201ENST00000561363 289 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 AC011458.1-201ENST00000604034 617 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 MZT1P2-201ENST00000604387 248 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 SNORA43.4-201ENST00000629559 138 ntBASIC0.84□□□□□ -2.27
ZIC4Q8N9L1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
ZIC4Q8N9L1 Y_RNA.399-201ENST00000383955 105 ntBASIC0.83□□□□□ -2.28
ZIC4Q8N9L1 SNORA29-201ENST00000384183 140 ntBASIC0.83□□□□□ -2.28
ZIC4Q8N9L1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
ZIC4Q8N9L1 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.83□□□□□ -2.28
ZIC4Q8N9L1 USP9YP14-201ENST00000430663 563 ntBASIC0.83□□□□□ -2.28
ZIC4Q8N9L1 RNU7-34P-201ENST00000459394 64 ntBASIC0.83□□□□□ -2.28
ZIC4Q8N9L1 AC114982.1-201ENST00000469402 321 ntBASIC0.83□□□□□ -2.28
ZIC4Q8N9L1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.83□□□□□ -2.28
ZIC4Q8N9L1 AC016256.1-201ENST00000547971 354 ntBASIC0.83□□□□□ -2.28
ZIC4Q8N9L1 AGGF1P4-201ENST00000568249 801 ntBASIC0.83□□□□□ -2.28
ZIC4Q8N9L1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.83□□□□□ -2.28
ZIC4Q8N9L1 MIR338-201ENST00000636369 67 ntBASIC0.83□□□□□ -2.28
ZIC4Q8N9L1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.83□□□□□ -2.28
ZIC4Q8N9L1 RNU6-1123P-201ENST00000362347 106 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 Y_RNA.164-201ENST00000363709 102 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 RNU6-534P-201ENST00000364877 106 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 RNA5SP259-201ENST00000365541 109 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 RNU6-456P-201ENST00000384493 107 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 RNU6-606P-201ENST00000384721 111 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 MIR222-201ENST00000384992 110 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 AL031577.2-201ENST00000404133 280 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 MIR1276-201ENST00000408707 83 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 RNU2-29P-201ENST00000410423 189 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 RPS27P1-201ENST00000450552 247 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 C1DP4-201ENST00000455429 424 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 MTND1P22-201ENST00000510572 951 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 RNU6-1129P-201ENST00000515964 104 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 RNU6-1146P-201ENST00000516282 102 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 RNU6-948P-201ENST00000516374 107 ntBASIC0.82□□□□□ -2.28
ZIC4Q8N9L1 Y_RNA.676-201ENST00000516393 96 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms