Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 SNORD114-30-201ENST00000364448 72 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 Y_RNA.297-201ENST00000364950 91 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 RNU1-73P-201ENST00000383971 164 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 RNY3P4-201ENST00000384428 101 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 Y_RNA.555-201ENST00000384673 110 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 SNORD58.1-201ENST00000391313 66 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 PCNPP3-201ENST00000393579 471 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SYNE4Q8N205 MIR888-201ENST00000401186 77 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 Y_RNA.602-201ENST00000410535 92 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 RPL26P27-201ENST00000414397 437 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 HMGN2P30-201ENST00000423237 256 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SYNE4Q8N205 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.28□□□□□ -1.88
SYNE4Q8N205 RPL30P14-201ENST00000482744 348 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 RPL30P1-201ENST00000488676 339 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 AC093023.1-201ENST00000547375 507 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.28□□□□□ -1.88
SYNE4Q8N205 MIR3609-201ENST00000582661 80 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 AC240442.1-201ENST00000616055 283 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 MIR6076-201ENST00000617521 113 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 MIR7153-201ENST00000637758 57 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 AC241585.2-209ENST00000638217 143 ntBASIC3.28□□□□□ -1.88
SYNE4Q8N205 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.28□□□□□ -1.88
SYNE4Q8N205 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SYNE4Q8N205 RNU6-1301P-201ENST00000362724 104 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 RNU6-1266P-201ENST00000362794 105 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 RNY1-201ENST00000364228 113 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 Y_RNA.439-201ENST00000384119 94 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 MIR487A-201ENST00000385009 80 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 MIR181B1-201ENST00000385240 110 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.27□□□□□ -1.89
SYNE4Q8N205 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.27□□□□□ -1.89
SYNE4Q8N205 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.27□□□□□ -1.89
SYNE4Q8N205 MTATP6P7-201ENST00000453315 681 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 RPS27AP10-201ENST00000496103 208 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 RNU6-991P-201ENST00000516168 107 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 RNU6-1012P-201ENST00000516606 109 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SYNE4Q8N205 AL391261.3-201ENST00000557194 520 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 MIR4782-201ENST00000577987 79 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 MIR4635-201ENST00000583759 79 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 AC099778.2-201ENST00000610904 211 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 AC004792.1-201ENST00000614523 137 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SYNE4Q8N205 SNORA50A-202ENST00000629536 136 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SYNE4Q8N205 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.27□□□□□ -1.89
SYNE4Q8N205 LINC02555-201ENST00000563933 1951 ntBASIC3.27□□□□□ -1.89
SYNE4Q8N205 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SYNE4Q8N205 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SYNE4Q8N205 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
SYNE4Q8N205 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SYNE4Q8N205 U3.13-201ENST00000364804 214 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 Y_RNA.352-201ENST00000365439 102 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 RNU6-926P-201ENST00000384075 107 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 RNU6-318P-201ENST00000384283 103 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 MIR518C-201ENST00000384822 101 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 MIR592-201ENST00000384959 97 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 MIR518D-201ENST00000385014 87 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 Y_RNA.581-201ENST00000391017 97 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 RNU6-493P-201ENST00000391321 108 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 RNA5SP38-201ENST00000410750 119 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 AL139156.1-201ENST00000412785 841 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 AC096920.1-201ENST00000423991 241 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SYNE4Q8N205 AL031659.1-201ENST00000447075 539 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.26□□□□□ -1.89
SYNE4Q8N205 AF186996.7-201ENST00000492781 209 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 RNU6-406P-201ENST00000516470 107 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 Y_RNA.706-201ENST00000516933 99 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 RNU6-548P-201ENST00000517083 115 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 AC022868.1-201ENST00000517767 391 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 AC093331.1-201ENST00000521474 169 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 DEFB122-202ENST00000569013 197 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 AC068831.7-201ENST00000616954 363 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 AC073308.1-201ENST00000623696 305 ntBASIC3.26□□□□□ -1.89
SYNE4Q8N205 AC092435.3-201ENST00000565538 3654 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.25□□□□□ -1.89
SYNE4Q8N205 SNORD113-8-201ENST00000363497 74 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 Y_RNA.286-201ENST00000364813 102 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 RNU6-898P-201ENST00000365627 104 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 MTCYBP2-201ENST00000407745 171 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 MIR548M-201ENST00000408260 86 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 AC098831.1-201ENST00000440661 216 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 HSPE1P25-201ENST00000455484 251 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 RPS26P21-201ENST00000475397 348 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 RPL23AP75-201ENST00000491601 451 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 RNU6-496P-201ENST00000516145 99 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 RNA5SP282-201ENST00000516355 108 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 SNORA43.2-201ENST00000516652 128 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 RNU6-182P-201ENST00000516970 105 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 AP000867.2-201ENST00000532468 320 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 AC010186.2-204ENST00000537668 439 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 MIR4659A-201ENST00000580269 81 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 AC020895.1-201ENST00000595362 272 ntBASIC3.25□□□□□ -1.89
SYNE4Q8N205 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.25□□□□□ -1.89
SYNE4Q8N205 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms