Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MAPK10-362ENST00000641864 4484 ntBASIC3□□□□□ -1.93
VRK3Q8IV63 HSPE1P26-201ENST00000405341 275 ntBASIC3□□□□□ -1.93
VRK3Q8IV63 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3□□□□□ -1.93
VRK3Q8IV63 NDUFS5P4-201ENST00000412983 318 ntBASIC3□□□□□ -1.93
VRK3Q8IV63 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3□□□□□ -1.93
VRK3Q8IV63 HMGN2P30-201ENST00000423237 256 ntBASIC3□□□□□ -1.93
VRK3Q8IV63 RPL21P66-201ENST00000426566 466 ntBASIC3□□□□□ -1.93
VRK3Q8IV63 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3□□□□□ -1.93
VRK3Q8IV63 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3□□□□□ -1.93
VRK3Q8IV63 AP000705.1-201ENST00000454567 350 ntBASIC3□□□□□ -1.93
VRK3Q8IV63 RN7SKP57-201ENST00000517248 293 ntBASIC3□□□□□ -1.93
VRK3Q8IV63 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3□□□□□ -1.93
VRK3Q8IV63 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3□□□□□ -1.93
VRK3Q8IV63 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3□□□□□ -1.93
VRK3Q8IV63 MIR548AI-201ENST00000579940 88 ntBASIC3□□□□□ -1.93
VRK3Q8IV63 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3□□□□□ -1.93
VRK3Q8IV63 AL357075.2-201ENST00000614906 189 ntBASIC3□□□□□ -1.93
VRK3Q8IV63 MIR8057-201ENST00000620957 69 ntBASIC3□□□□□ -1.93
VRK3Q8IV63 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3□□□□□ -1.93
VRK3Q8IV63 MIR622-201ENST00000638396 96 ntBASIC3□□□□□ -1.93
VRK3Q8IV63 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3□□□□□ -1.93
VRK3Q8IV63 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
VRK3Q8IV63 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3□□□□□ -1.93
VRK3Q8IV63 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
VRK3Q8IV63 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
VRK3Q8IV63 AC135776.4-201ENST00000624300 1904 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.99□□□□□ -1.93
VRK3Q8IV63 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
VRK3Q8IV63 AC073346.2-201ENST00000624724 2058 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
VRK3Q8IV63 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 MIR148B-201ENST00000362252 99 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 RNU6-884P-201ENST00000363889 107 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 Y_RNA.304-201ENST00000365011 112 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 SNORA36A-201ENST00000384221 132 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 RNU6-1035P-201ENST00000384477 107 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 MIR544A-201ENST00000384855 91 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 Y_RNA.580-201ENST00000391004 95 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 AL451074.5-201ENST00000415894 435 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 OOSP1P1-201ENST00000423265 274 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.99□□□□□ -1.93
VRK3Q8IV63 GPM6BP3-201ENST00000442797 145 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 MRPS10P1-201ENST00000448483 130 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 RNA5SP54-201ENST00000516951 92 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 CYCSP23-201ENST00000519781 313 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VRK3Q8IV63 HSPE1P4-201ENST00000550617 308 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 AC055872.1-201ENST00000570978 278 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 MIR5195-201ENST00000583555 115 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 AC005176.2-201ENST00000596933 147 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 AC007318.2-201ENST00000620999 243 ntBASIC2.99□□□□□ -1.93
VRK3Q8IV63 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
VRK3Q8IV63 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VRK3Q8IV63 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VRK3Q8IV63 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.99□□□□□ -1.93
VRK3Q8IV63 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
VRK3Q8IV63 AC092268.1-201ENST00000342691 405 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 RNU6-1285P-201ENST00000363480 105 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 RNU6-923P-201ENST00000364753 107 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 Y_RNA.331-201ENST00000365267 102 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 SNORA46-201ENST00000384762 135 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 RPL23AP83-201ENST00000434984 473 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 POLR2KP2-201ENST00000438155 177 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 AC009969.1-201ENST00000438726 172 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 RPL23AP3-201ENST00000453844 468 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 AC007215.1-201ENST00000464893 276 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 RPS27AP10-201ENST00000496103 208 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 AC074133.1-201ENST00000515696 183 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 RNU6-1219P-201ENST00000516143 112 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 RNY3P16-201ENST00000516338 101 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 AC068657.1-201ENST00000520807 306 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.98□□□□□ -1.93
VRK3Q8IV63 AP005660.1-201ENST00000522972 293 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 MIR5692C2-201ENST00000577959 77 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 AL451007.1-201ENST00000595491 289 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 AC006001.4-201ENST00000622243 395 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.98□□□□□ -1.93
VRK3Q8IV63 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VRK3Q8IV63 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.98□□□□□ -1.93
VRK3Q8IV63 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VRK3Q8IV63 AC110491.1-201ENST00000562191 2010 ntBASIC2.98□□□□□ -1.93
VRK3Q8IV63 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.98□□□□□ -1.93
VRK3Q8IV63 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.97□□□□□ -1.93
VRK3Q8IV63 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.97□□□□□ -1.93
VRK3Q8IV63 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VRK3Q8IV63 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
VRK3Q8IV63 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.97□□□□□ -1.93
VRK3Q8IV63 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VRK3Q8IV63 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VRK3Q8IV63 MIR22-201ENST00000362190 85 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 RNU6-600P-201ENST00000362524 99 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 RNU1-140P-201ENST00000365040 165 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 Y_RNA.398-201ENST00000383952 99 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 RNA5SP390-201ENST00000410191 113 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 Y_RNA.595-201ENST00000410403 105 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 RN7SKP220-201ENST00000410611 288 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 RNU6-1199P-201ENST00000411249 104 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 VDAC1P3-201ENST00000434069 851 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 AC112220.1-201ENST00000434628 355 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms