Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RNF180Q86T96 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
RNF180Q86T96 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF180Q86T96 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNF180Q86T96 AC091812.1-201ENST00000432235 1948 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF180Q86T96 Y_RNA.27-201ENST00000362540 103 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 Y_RNA.152-201ENST00000363578 100 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 SNORA63.7-201ENST00000365579 123 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 Y_RNA.455-201ENST00000384230 98 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 MIR1261-201ENST00000408659 82 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 RNA5SP274-201ENST00000410484 108 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 RNU2-52P-201ENST00000410680 190 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 RPL32P35-201ENST00000415214 394 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 WARS2P1-201ENST00000429678 537 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 CBX3P6-201ENST00000430257 527 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 AL161788.1-201ENST00000441805 169 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 AC096638.1-201ENST00000444678 216 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 AC091179.1-201ENST00000461606 579 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 TRBV12-1-201ENST00000479785 344 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.23□□□□□ -1.89
RNF180Q86T96 RNA5SP380-201ENST00000517190 98 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 AC040926.1-201ENST00000530195 238 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF180Q86T96 AL390123.1-201ENST00000603216 237 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 AC124312.5-201ENST00000604451 268 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNF180Q86T96 Z82209.1-201ENST00000422141 2135 ntBASIC3.23□□□□□ -1.89
RNF180Q86T96 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
RNF180Q86T96 Y_RNA.485-201ENST00000384395 102 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 RNY3P4-201ENST00000384428 101 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 SNORA51.11-201ENST00000384442 131 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 MIR10B-201ENST00000385011 110 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RNF180Q86T96 Y_RNA.645-201ENST00000391229 102 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 MIR1294-201ENST00000408503 142 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 Y_RNA.597-201ENST00000410463 100 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 RNA5SP293-201ENST00000410527 113 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 EIF1P2-201ENST00000428233 350 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 CHEK2P4-201ENST00000450340 246 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 MTND5P22-201ENST00000458380 195 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.22□□□□□ -1.89
RNF180Q86T96 RNA5SP217-201ENST00000515959 91 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 RNU6-764P-201ENST00000516396 105 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 SNORA25.14-201ENST00000516481 132 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF180Q86T96 AC091544.4-201ENST00000555268 342 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 AC005562.2-201ENST00000618264 111 ntBASIC3.22□□□□□ -1.89
RNF180Q86T96 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.22□□□□□ -1.89
RNF180Q86T96 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF180Q86T96 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF180Q86T96 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.21□□□□□ -1.89
RNF180Q86T96 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
RNF180Q86T96 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RNF180Q86T96 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.21□□□□□ -1.9
RNF180Q86T96 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
RNF180Q86T96 RNU1-76P-201ENST00000362903 159 ntBASIC3.21□□□□□ -1.9
RNF180Q86T96 Y_RNA.380-201ENST00000365663 111 ntBASIC3.21□□□□□ -1.9
RNF180Q86T96 SET-203ENST00000372688 801 ntTSL 2 BASIC3.21□□□□□ -1.9
RNF180Q86T96 Y_RNA.459-201ENST00000384251 102 ntBASIC3.21□□□□□ -1.9
RNF180Q86T96 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.21□□□□□ -1.9
RNF180Q86T96 ARL5AP4-201ENST00000430731 512 ntBASIC3.21□□□□□ -1.9
RNF180Q86T96 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.21□□□□□ -1.9
RNF180Q86T96 AC103975.1-201ENST00000482506 483 ntBASIC3.21□□□□□ -1.9
RNF180Q86T96 RN7SKP282-201ENST00000516824 299 ntBASIC3.21□□□□□ -1.9
RNF180Q86T96 SCARNA20.6-201ENST00000517251 106 ntBASIC3.21□□□□□ -1.9
RNF180Q86T96 CYCSP23-201ENST00000519781 313 ntBASIC3.21□□□□□ -1.9
RNF180Q86T96 HSPE1P20-201ENST00000538133 289 ntBASIC3.21□□□□□ -1.9
RNF180Q86T96 AC093023.1-201ENST00000547375 507 ntBASIC3.21□□□□□ -1.9
RNF180Q86T96 AC104695.3-201ENST00000604052 296 ntBASIC3.21□□□□□ -1.9
RNF180Q86T96 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.21□□□□□ -1.9
RNF180Q86T96 ZNF72P-201ENST00000425869 1908 ntBASIC3.21□□□□□ -1.9
RNF180Q86T96 RNU6-859P-201ENST00000362728 107 ntBASIC3.2□□□□□ -1.9
RNF180Q86T96 RNU1-72P-201ENST00000362976 153 ntBASIC3.2□□□□□ -1.9
RNF180Q86T96 RNU6-873P-201ENST00000363833 107 ntBASIC3.2□□□□□ -1.9
RNF180Q86T96 RNU6-1180P-201ENST00000364935 107 ntBASIC3.2□□□□□ -1.9
RNF180Q86T96 RNU6-1274P-201ENST00000384557 107 ntBASIC3.2□□□□□ -1.9
RNF180Q86T96 Y_RNA.527-201ENST00000384573 102 ntBASIC3.2□□□□□ -1.9
RNF180Q86T96 MIR9-1-201ENST00000385198 89 ntBASIC3.2□□□□□ -1.9
RNF180Q86T96 RNU6-220P-201ENST00000390919 107 ntBASIC3.2□□□□□ -1.9
RNF180Q86T96 SNORD78.2-201ENST00000391076 69 ntBASIC3.2□□□□□ -1.9
RNF180Q86T96 AL445687.1-201ENST00000439946 251 ntBASIC3.2□□□□□ -1.9
RNF180Q86T96 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.2□□□□□ -1.9
RNF180Q86T96 Y_RNA.713-201ENST00000517013 96 ntBASIC3.2□□□□□ -1.9
RNF180Q86T96 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.2□□□□□ -1.9
RNF180Q86T96 AP002770.2-201ENST00000543613 532 ntBASIC3.2□□□□□ -1.9
RNF180Q86T96 UBL5P4-201ENST00000562584 236 ntBASIC3.2□□□□□ -1.9
RNF180Q86T96 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.2□□□□□ -1.9
RNF180Q86T96 TCL6_2.1-201ENST00000615162 119 ntBASIC3.2□□□□□ -1.9
RNF180Q86T96 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RNF180Q86T96 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RNF180Q86T96 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.19□□□□□ -1.9
RNF180Q86T96 RNU6-805P-201ENST00000365643 106 ntBASIC3.19□□□□□ -1.9
RNF180Q86T96 MIR487A-201ENST00000385009 80 ntBASIC3.19□□□□□ -1.9
RNF180Q86T96 RNU6-823P-201ENST00000391042 103 ntBASIC3.19□□□□□ -1.9
RNF180Q86T96 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.19□□□□□ -1.9
RNF180Q86T96 AC027124.2-201ENST00000428249 105 ntBASIC3.19□□□□□ -1.9
RNF180Q86T96 AC092427.1-202ENST00000430569 476 ntBASIC3.19□□□□□ -1.9
RNF180Q86T96 AL121890.1-201ENST00000435457 205 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms