Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC019205.3-201ENST00000424573 156 ntBASIC2.94□□□□□ -1.94
KRT28Q7Z3Y7 AC016700.2-201ENST00000446011 156 ntBASIC2.94□□□□□ -1.94
KRT28Q7Z3Y7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.94□□□□□ -1.94
KRT28Q7Z3Y7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.94□□□□□ -1.94
KRT28Q7Z3Y7 AC015911.1-201ENST00000495111 156 ntBASIC2.94□□□□□ -1.94
KRT28Q7Z3Y7 AIG1P1-201ENST00000503376 148 ntBASIC2.94□□□□□ -1.94
KRT28Q7Z3Y7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.94□□□□□ -1.94
KRT28Q7Z3Y7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.94□□□□□ -1.94
KRT28Q7Z3Y7 HSPE1P20-201ENST00000538133 289 ntBASIC2.94□□□□□ -1.94
KRT28Q7Z3Y7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.94□□□□□ -1.94
KRT28Q7Z3Y7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
KRT28Q7Z3Y7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.94□□□□□ -1.94
KRT28Q7Z3Y7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
KRT28Q7Z3Y7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 MIR369-201ENST00000362155 70 ntBASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 RNU6-655P-201ENST00000362858 107 ntBASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 RNU6-1285P-201ENST00000363480 105 ntBASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 SNORA68.1-201ENST00000364537 132 ntBASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 RNU6-1040P-201ENST00000383974 107 ntBASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 AC243428.1-201ENST00000421099 264 ntBASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 RNU2-53P-201ENST00000516257 147 ntBASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 RNU6-1153P-201ENST00000516760 105 ntBASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 RNU6-826P-201ENST00000516827 104 ntBASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 COX6CP5-201ENST00000527162 228 ntBASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 AC021231.3-201ENST00000558497 370 ntBASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 AC060766.3-201ENST00000591442 263 ntBASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 AL080274.1-201ENST00000605565 220 ntBASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 AL159153.1-201ENST00000619688 317 ntBASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 MIR6132-201ENST00000622083 109 ntBASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KRT28Q7Z3Y7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 AP000560.1-201ENST00000624150 1937 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 RNU6-1115P-201ENST00000362490 106 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 SNORD56.5-201ENST00000364281 72 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 RNU6-1227P-201ENST00000383981 107 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 RNU6-1011P-201ENST00000384668 107 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 RNA5SP492-201ENST00000411330 114 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 CYCSP48-201ENST00000417124 323 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 Z96811.1-201ENST00000445880 108 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 AC073901.1-201ENST00000462471 408 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 RPL17P19-201ENST00000489069 552 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 RNU6-120P-201ENST00000516077 103 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 MIR3199-1-201ENST00000582434 88 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 MIR3136-201ENST00000583498 78 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 AL670379.2-201ENST00000604983 252 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 SNORD98-201ENST00000636377 67 ntBASIC2.92□□□□□ -1.94
KRT28Q7Z3Y7 AC010329.5-201ENST00000623497 2174 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 RNU6-490P-201ENST00000362985 107 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 Y_RNA.138-201ENST00000363462 102 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 RNU6-1210P-201ENST00000363775 107 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 RNU6-595P-201ENST00000363944 107 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 Y_RNA.197-201ENST00000364004 102 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 SNORA25.6-201ENST00000364121 118 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 RNU1-51P-201ENST00000365345 176 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 RNU1-109P-201ENST00000383960 147 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 SNORA29-201ENST00000384183 140 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 MIR559-201ENST00000385188 96 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 RNU6-700P-201ENST00000391043 107 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 SNORA26.3-201ENST00000391119 136 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 RNA5SP494-201ENST00000410653 129 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 UBBP3-201ENST00000445497 241 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 RPL30P1-201ENST00000488676 339 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 AC140059.1-201ENST00000489238 361 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 AC021146.2-201ENST00000504736 556 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 RNU5F-2P-201ENST00000516066 82 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 RNA5SP76-201ENST00000516277 87 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 AL590705.4-201ENST00000532209 134 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 AC005014.2-201ENST00000607795 599 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 SNORA43.4-201ENST00000629559 138 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 MIR7157-201ENST00000635801 60 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 ZNF355P-201ENST00000427301 3216 ntBASIC2.91□□□□□ -1.94
KRT28Q7Z3Y7 Y_RNA.112-201ENST00000363250 102 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 RNU4-9P-201ENST00000364951 139 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 SNORA36A-201ENST00000384221 132 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 RNU6-1328P-201ENST00000410938 106 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 snoU13.14-201ENST00000459372 104 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 RNU7-175P-201ENST00000515915 61 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.661-201ENST00000516003 99 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 RNU6-567P-201ENST00000516746 107 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 SNORA31.16-201ENST00000516773 139 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 SCARNA3-201ENST00000517097 143 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms