Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNU6-102P-201ENST00000384485 104 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 Y_RNA.541-201ENST00000384640 113 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 MIR32-201ENST00000384965 70 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 MIR487A-201ENST00000385009 80 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 Y_RNA.581-201ENST00000391017 97 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 RNA5SP210-201ENST00000391034 120 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 EIF1AXP1-201ENST00000419267 435 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 AL139281.1-201ENST00000422120 335 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 AC004383.1-201ENST00000438135 289 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 AC105272.1-201ENST00000438604 198 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 AL353705.4-201ENST00000449661 238 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 AC087477.1-201ENST00000465747 340 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 RPS23P5-201ENST00000495419 428 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 AC006445.2-201ENST00000510061 472 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 RNU6-581P-201ENST00000516214 105 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 AC093023.1-201ENST00000547375 507 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 AC023824.2-201ENST00000566185 400 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 MIR3609-201ENST00000582661 80 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 HSPE1P7-201ENST00000604681 321 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 AC011476.5-201ENST00000615594 130 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 AL365361.1-201ENST00000566942 3481 ntBASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ZNF549Q6P9A3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 SNORD81.1-201ENST00000363064 77 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 MIR9-1-201ENST00000385198 89 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 SNORA26.7-201ENST00000391288 122 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 RNU2-20P-201ENST00000410425 191 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 AC124916.1-201ENST00000444020 547 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 AC016700.2-201ENST00000446011 156 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 AP001486.1-201ENST00000463339 476 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 RNU6-138P-201ENST00000515952 107 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 RNU6-1338P-201ENST00000516328 91 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 AC022868.1-201ENST00000517767 391 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 AC016256.1-201ENST00000547971 354 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 EIF4BP1-201ENST00000554881 351 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 AC021739.1-201ENST00000559631 174 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 MIR4659A-201ENST00000580269 81 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 AC009779.6-201ENST00000603972 165 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 AC019159.1-201ENST00000605094 187 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 AL356157.2-201ENST00000605122 111 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 AL359198.2-201ENST00000611836 194 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 AC024581.2-201ENST00000619986 252 ntBASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
ZNF549Q6P9A3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 AC110491.1-201ENST00000562191 2010 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 FAM35BP-202ENST00000497389 3337 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 AL391987.6-201ENST00000305671 199 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 RNY1-201ENST00000364228 113 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 RNU6-200P-201ENST00000364743 107 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 RNU6-338P-201ENST00000383888 105 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 SNORA36A-201ENST00000384221 132 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 RNU6-622P-201ENST00000384272 103 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 RNU6-937P-201ENST00000384325 106 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 SNORD78.2-201ENST00000391076 69 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 AC096920.1-201ENST00000423991 241 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 AC096638.1-201ENST00000444678 216 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 AP000705.1-201ENST00000454567 350 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 MED28P2-201ENST00000475771 317 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 RPL26P26-201ENST00000480251 434 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 RNU6-496P-201ENST00000516145 99 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 SNORA31.6-201ENST00000516241 130 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 RNA5SP282-201ENST00000516355 108 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 SNORA31.21-201ENST00000517180 77 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 CKS1BP7-201ENST00000522230 235 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 DEFB108E-201ENST00000524692 240 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 AL133393.1-201ENST00000603277 287 ntBASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ZNF549Q6P9A3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
ZNF549Q6P9A3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ZNF549Q6P9A3 RNA5SP361-201ENST00000362686 118 ntBASIC2.58□□□□□ -2
ZNF549Q6P9A3 Y_RNA.111-201ENST00000363248 100 ntBASIC2.58□□□□□ -2
ZNF549Q6P9A3 RNU6-1285P-201ENST00000363480 105 ntBASIC2.58□□□□□ -2
ZNF549Q6P9A3 SNORD27-201ENST00000363981 72 ntBASIC2.58□□□□□ -2
ZNF549Q6P9A3 RNU6-843P-201ENST00000384454 104 ntBASIC2.58□□□□□ -2
ZNF549Q6P9A3 MIR544A-201ENST00000384855 91 ntBASIC2.58□□□□□ -2
ZNF549Q6P9A3 MIR10B-201ENST00000385011 110 ntBASIC2.58□□□□□ -2
ZNF549Q6P9A3 MIR153-2-201ENST00000385225 87 ntBASIC2.58□□□□□ -2
ZNF549Q6P9A3 AL603910.2-201ENST00000407268 136 ntBASIC2.58□□□□□ -2
ZNF549Q6P9A3 MIR548H3-201ENST00000408771 118 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms