Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 AL157777.2-201ENST00000258070 137 ntBASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.136-201ENST00000363444 102 ntBASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 RNU6-682P-201ENST00000363843 106 ntBASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 RNU6-793P-201ENST00000384233 104 ntBASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.498-201ENST00000384460 102 ntBASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 RNU6-19P-201ENST00000384718 107 ntBASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 RNU6-493P-201ENST00000391321 108 ntBASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 RPS15AP5-201ENST00000436276 388 ntBASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 AC107934.2-201ENST00000518653 310 ntBASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 CYP4A27P-201ENST00000567218 190 ntBASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 MIR3136-201ENST00000583498 78 ntBASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 AL078605.1-201ENST00000603529 500 ntBASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 AL138880.2-201ENST00000616214 239 ntBASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 AL590240.4-201ENST00000616908 390 ntBASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 AC018692.3-201ENST00000623929 123 ntBASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF40BQ6NWY9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 UBE2WP1-201ENST00000362030 340 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.82-201ENST00000363000 102 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.92-201ENST00000363043 102 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.235-201ENST00000364412 102 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.306-201ENST00000365015 102 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.312-201ENST00000365089 102 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.322-201ENST00000365151 102 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 RNU6-47P-201ENST00000383866 107 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 AL512633.1-201ENST00000399931 655 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 RNU6-1140P-201ENST00000410517 106 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 RPL19P1-201ENST00000411635 428 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 AC126124.2-201ENST00000413542 321 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.650-201ENST00000459002 102 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 CENPBD1P1-201ENST00000464061 469 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 RPL7P47-201ENST00000497299 556 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 AC008885.1-201ENST00000514930 301 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 AC074133.1-201ENST00000515696 183 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 RNU6-1278P-201ENST00000516130 107 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 RNU6-255P-201ENST00000516957 105 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.777-201ENST00000516982 102 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 AC018448.1-201ENST00000552843 316 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 AC233702.2-202ENST00000562547 291 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.771-201ENST00000598668 102 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.789-201ENST00000622480 102 ntBASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRPF40BQ6NWY9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 RNU6-245P-201ENST00000384020 107 ntBASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 MIR549A-201ENST00000385268 96 ntBASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 RN7SKP284-201ENST00000411002 343 ntBASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 AL159169.1-201ENST00000421119 127 ntBASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 AC010401.1-201ENST00000463867 348 ntBASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 AIG1P1-201ENST00000503376 148 ntBASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 Y_RNA.662-201ENST00000516028 97 ntBASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 AC022559.1-201ENST00000520905 205 ntBASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 MZT1P2-201ENST00000604387 248 ntBASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 AC022441.3-201ENST00000605737 136 ntBASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 AC099654.7-201ENST00000635788 2127 ntBASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
PRPF40BQ6NWY9 PWAR6-201ENST00000552334 4618 ntBASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 AC092593.1-201ENST00000515413 1815 ntBASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 RNU1-70P-201ENST00000362618 164 ntBASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 RNU6-187P-201ENST00000384139 106 ntBASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 AL133475.1-201ENST00000404414 305 ntBASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 RNU7-170P-201ENST00000459303 61 ntBASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 RPL23AP67-201ENST00000465341 474 ntBASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 AC021205.2-201ENST00000480069 347 ntBASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 RNU6-1212P-201ENST00000517023 104 ntBASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 MIR4282-201ENST00000583613 67 ntBASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 AL356575.1-201ENST00000603008 283 ntBASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 AC073349.3-201ENST00000617616 186 ntBASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 AL109809.4-201ENST00000603520 2185 ntBASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRPF40BQ6NWY9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.02□□□□□ -1.77
PRPF40BQ6NWY9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPF40BQ6NWY9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PRPF40BQ6NWY9 MIR449A-201ENST00000362113 91 ntBASIC4.02□□□□□ -1.77
PRPF40BQ6NWY9 RNU6-727P-201ENST00000363592 107 ntBASIC4.02□□□□□ -1.77
PRPF40BQ6NWY9 RNU6-748P-201ENST00000384648 107 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms