Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.58□□□□□ -2.16
ATL3Q6DD88 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.58□□□□□ -2.16
ATL3Q6DD88 AC021231.3-201ENST00000558497 370 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.58□□□□□ -2.16
ATL3Q6DD88 AC005786.1-201ENST00000588553 154 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.58□□□□□ -2.16
ATL3Q6DD88 AC092747.3-201ENST00000603769 301 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 AC016727.1-205ENST00000605437 569 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 AC009994.1-201ENST00000606889 253 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 AC092954.2-201ENST00000609103 430 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 AC092807.2-201ENST00000609367 243 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 AL121757.2-201ENST00000611223 313 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 AC048344.4-201ENST00000619744 527 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.58□□□□□ -2.16
ATL3Q6DD88 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.58□□□□□ -2.16
ATL3Q6DD88 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.58□□□□□ -2.16
ATL3Q6DD88 RNU1-62P-201ENST00000362599 164 ntBASIC1.57□□□□□ -2.16
ATL3Q6DD88 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.57□□□□□ -2.16
ATL3Q6DD88 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.57□□□□□ -2.16
ATL3Q6DD88 AC123900.1-201ENST00000420390 96 ntBASIC1.57□□□□□ -2.16
ATL3Q6DD88 AC012306.1-201ENST00000423267 114 ntBASIC1.57□□□□□ -2.16
ATL3Q6DD88 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.57□□□□□ -2.16
ATL3Q6DD88 AC025465.4-201ENST00000513422 638 ntBASIC1.57□□□□□ -2.16
ATL3Q6DD88 SNORD60.2-201ENST00000516883 86 ntBASIC1.57□□□□□ -2.16
ATL3Q6DD88 RNA5SP490-201ENST00000517141 136 ntBASIC1.57□□□□□ -2.16
ATL3Q6DD88 AL157687.1-201ENST00000554853 619 ntBASIC1.57□□□□□ -2.16
ATL3Q6DD88 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.57□□□□□ -2.16
ATL3Q6DD88 CPDP1-201ENST00000579660 283 ntBASIC1.57□□□□□ -2.16
ATL3Q6DD88 AC064807.4-201ENST00000607201 407 ntBASIC1.57□□□□□ -2.16
ATL3Q6DD88 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.57□□□□□ -2.16
ATL3Q6DD88 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.57□□□□□ -2.16
ATL3Q6DD88 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
ATL3Q6DD88 LINC02555-201ENST00000563933 1951 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
ATL3Q6DD88 Y_RNA.41-201ENST00000362646 102 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 RNU6-227P-201ENST00000362865 103 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 RNU6-780P-201ENST00000391030 104 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
ATL3Q6DD88 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 RNU6-1068P-201ENST00000410958 103 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 NCOR1P3-201ENST00000420479 303 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.56□□□□□ -2.16
ATL3Q6DD88 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.56□□□□□ -2.16
ATL3Q6DD88 HSPE1P24-201ENST00000450782 238 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 TOMM22P6-201ENST00000465035 409 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 RPL9P9-202ENST00000466501 579 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.56□□□□□ -2.16
ATL3Q6DD88 AC021146.2-201ENST00000504736 556 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 RNVU1-2-201ENST00000516326 135 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 RNU6-1098P-201ENST00000516772 96 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.56□□□□□ -2.16
ATL3Q6DD88 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ATL3Q6DD88 AC016256.1-201ENST00000547971 354 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 SCOCP1-201ENST00000554676 349 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.56□□□□□ -2.16
ATL3Q6DD88 RNU6-89P-201ENST00000606519 100 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.56□□□□□ -2.16
ATL3Q6DD88 FAM157A-202ENST00000615155 405 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 AL590240.4-201ENST00000616908 390 ntBASIC1.56□□□□□ -2.16
ATL3Q6DD88 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.56□□□□□ -2.16
ATL3Q6DD88 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
ATL3Q6DD88 RNU5B-2P-201ENST00000363036 113 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 RNU6-908P-201ENST00000410160 94 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 RNA5SP100-201ENST00000410903 110 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 RNA5SP59-201ENST00000410922 110 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 RNA5SP247-201ENST00000411181 105 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 ARL5AP1-201ENST00000418991 388 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 MTCO1P20-201ENST00000425366 358 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.55□□□□□ -2.16
ATL3Q6DD88 AL359672.1-201ENST00000442302 409 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.55□□□□□ -2.16
ATL3Q6DD88 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.55□□□□□ -2.16
ATL3Q6DD88 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.55□□□□□ -2.16
ATL3Q6DD88 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.55□□□□□ -2.16
ATL3Q6DD88 RNU6-567P-201ENST00000516746 107 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 AC025423.5-201ENST00000550230 219 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 AL512360.1-201ENST00000555346 234 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.55□□□□□ -2.16
ATL3Q6DD88 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.55□□□□□ -2.16
ATL3Q6DD88 AC015720.1-201ENST00000565251 277 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 SUB1P4-201ENST00000566062 339 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 AC100830.2-201ENST00000581636 240 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 AC103591.3-201ENST00000608684 209 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.55□□□□□ -2.16
ATL3Q6DD88 MIR337-201ENST00000362281 93 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 RNU1-76P-201ENST00000362903 159 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 RNU4-24P-201ENST00000364565 139 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 RNU6-203P-201ENST00000384038 104 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 RNU6-483P-201ENST00000384088 108 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 SNORA29-201ENST00000384183 140 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 SNORD37.1-201ENST00000390968 65 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 EIF4E2P1-201ENST00000393781 255 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.54□□□□□ -2.16
ATL3Q6DD88 MTCO1P44-201ENST00000441935 243 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 SNORD13-201ENST00000459299 104 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms