Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 AC012306.1-201ENST00000423267 114 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 SDAD1P3-201ENST00000427380 333 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 RPS29P6-201ENST00000438196 145 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 AP000705.1-201ENST00000454567 350 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 RPS27P26-201ENST00000494583 239 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 AC067942.3-201ENST00000512025 362 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 RNU6-1114P-201ENST00000516022 107 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 AC115990.1-201ENST00000526957 301 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 AC016256.1-201ENST00000547971 354 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 AC027288.2-201ENST00000553028 243 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 AL078605.1-201ENST00000603529 500 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 AL033523.1-201ENST00000605153 153 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 OR56A5-201ENST00000340110 738 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 Y_RNA.143-201ENST00000363520 106 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 RNU4-56P-201ENST00000364700 142 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 Y_RNA.276-201ENST00000364732 109 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 Y_RNA.288-201ENST00000364854 92 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 Y_RNA.307-201ENST00000365022 117 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 Y_RNA.376-201ENST00000365638 108 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 Y_RNA.483-201ENST00000384380 101 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 MIR634-201ENST00000385208 97 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 SNORD78.2-201ENST00000391076 69 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 MIR208B-201ENST00000401172 77 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 AC025750.2-201ENST00000442609 450 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 RPL39P40-201ENST00000445481 146 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 FCF1P4-201ENST00000448326 183 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 LINC01399-202ENST00000458450 244 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 AC098869.1-201ENST00000481627 292 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 AIG1P1-201ENST00000503376 148 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 RNU6-58P-201ENST00000517143 103 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 AP003733.2-201ENST00000529409 171 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 MIR4659A-201ENST00000580269 81 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 AL391813.1-201ENST00000603098 260 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 AL138963.2-201ENST00000605137 226 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 AC062037.2-201ENST00000610137 73 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 AC107871.2-201ENST00000612894 502 ntBASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC178Q5BJE1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC178Q5BJE1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CCDC178Q5BJE1 Y_RNA.183-201ENST00000363882 113 ntBASIC3.22□□□□□ -1.89
CCDC178Q5BJE1 SNORA14A-201ENST00000364773 135 ntBASIC3.22□□□□□ -1.89
CCDC178Q5BJE1 MT-TW-201ENST00000387382 68 ntBASIC3.22□□□□□ -1.89
CCDC178Q5BJE1 RNU6-1093P-201ENST00000391194 107 ntBASIC3.22□□□□□ -1.89
CCDC178Q5BJE1 RPL19P1-201ENST00000411635 428 ntBASIC3.22□□□□□ -1.89
CCDC178Q5BJE1 AC009414.1-201ENST00000427200 443 ntBASIC3.22□□□□□ -1.89
CCDC178Q5BJE1 EIF1P2-201ENST00000428233 350 ntBASIC3.22□□□□□ -1.89
CCDC178Q5BJE1 AC003982.1-202ENST00000469928 248 ntBASIC3.22□□□□□ -1.89
CCDC178Q5BJE1 RPL36AP48-201ENST00000485521 314 ntBASIC3.22□□□□□ -1.89
CCDC178Q5BJE1 RNU6-1143P-201ENST00000516125 104 ntBASIC3.22□□□□□ -1.89
CCDC178Q5BJE1 Y_RNA.772-201ENST00000606692 102 ntBASIC3.22□□□□□ -1.89
CCDC178Q5BJE1 AC240442.1-201ENST00000616055 283 ntBASIC3.22□□□□□ -1.89
CCDC178Q5BJE1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC178Q5BJE1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 Y_RNA.40-201ENST00000362645 93 ntBASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 RNU6-611P-201ENST00000384276 104 ntBASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 RNU6-318P-201ENST00000384283 103 ntBASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 MIR181A2-201ENST00000384863 110 ntBASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 MIR10B-201ENST00000385011 110 ntBASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 AL079342.1-201ENST00000401460 267 ntBASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 RNU6-121P-201ENST00000410525 99 ntBASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 RNU6-1001P-201ENST00000411265 100 ntBASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 Z98742.2-201ENST00000431564 187 ntBASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 AP001486.1-201ENST00000463339 476 ntBASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 RNU5F-2P-201ENST00000516066 82 ntBASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 MIR376A1-201ENST00000616574 68 ntBASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC178Q5BJE1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 RNU6-472P-201ENST00000384299 107 ntBASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 Y_RNA.476-201ENST00000384347 108 ntBASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 RNU1-139P-201ENST00000391307 165 ntBASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 AL512633.1-201ENST00000399931 655 ntBASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 SNORD12B-201ENST00000410433 91 ntBASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 AC063976.3-201ENST00000426849 329 ntBASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 AL365496.1-201ENST00000426885 215 ntBASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC178Q5BJE1 AL049873.1-201ENST00000480540 376 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms