Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TMEM259Q4ZIN3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.3□□□□□ -1.72
TMEM259Q4ZIN3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 RNA5SP306-201ENST00000411087 107 ntBASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 RNU6-221P-201ENST00000459541 99 ntBASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 AC110741.2-201ENST00000605278 268 ntBASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 RNA5SP196-201ENST00000625967 102 ntBASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 AL159152.1-201ENST00000635019 2587 ntBASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 AC091564.4-201ENST00000533934 2194 ntBASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TMEM259Q4ZIN3 AL356292.1-201ENST00000283110 373 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 SNORD31B-201ENST00000364977 69 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 RNU6-438P-201ENST00000365561 103 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 RNU1-13P-201ENST00000384499 162 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 SNORA57.1-201ENST00000391227 145 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 RPS26P55-201ENST00000471178 356 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 RPL23AP54-201ENST00000495129 419 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 ATP5EP1-201ENST00000510257 156 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 RNA5SP20-201ENST00000515976 84 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 RNU6-948P-201ENST00000516374 107 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 RNA5SP519-201ENST00000516480 119 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 RN7SL600P-201ENST00000581811 299 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 AP003357.1-201ENST00000604497 148 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 AC005972.2-201ENST00000604690 348 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 AC112484.5-201ENST00000624189 228 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 MIR6844-201ENST00000637122 62 ntBASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TMEM259Q4ZIN3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 RNA5SP322-201ENST00000363617 119 ntBASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 RNU6-1323P-201ENST00000384025 107 ntBASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 RNU1-44P-201ENST00000384453 163 ntBASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 AC099522.1-202ENST00000514718 367 ntBASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 MIR2116-201ENST00000517221 80 ntBASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 LARP7P3-201ENST00000579888 337 ntBASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 AC023043.3-201ENST00000593113 385 ntBASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.27□□□□□ -1.73
TMEM259Q4ZIN3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 RNU6-418P-201ENST00000384035 107 ntBASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 Y_RNA.420-201ENST00000384043 110 ntBASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 RNU1-89P-201ENST00000384592 164 ntBASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 Y_RNA.542-201ENST00000384641 111 ntBASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 MIR181A2-201ENST00000384863 110 ntBASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 SNORD59.2-201ENST00000516873 68 ntBASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 RNU7-116P-201ENST00000516940 62 ntBASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 AC013412.1-201ENST00000610687 192 ntBASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.26□□□□□ -1.73
TMEM259Q4ZIN3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 MIR539-201ENST00000365690 78 ntBASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 MIR218-1-201ENST00000384999 110 ntBASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 SNORA11-201ENST00000408789 128 ntBASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 Y_RNA.622-201ENST00000411091 108 ntBASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 Y_RNA.629-201ENST00000411368 105 ntBASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 RPS27P1-201ENST00000450552 247 ntBASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.25□□□□□ -1.73
TMEM259Q4ZIN3 RNU6-63P-201ENST00000516690 95 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms