Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 AC024614.3-201ENST00000637860 256 ntBASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-60P-201ENST00000364792 103 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-1215P-201ENST00000384441 102 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 SNORA67.5-201ENST00000391036 107 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 EIF4E2P1-201ENST00000393781 255 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 MIR548F1-201ENST00000408667 84 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 RN7SKP101-201ENST00000411376 320 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 SRIP3-201ENST00000413200 219 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 AC025465.4-201ENST00000513422 638 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 AP005660.1-201ENST00000522972 293 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 TPRKBP2-201ENST00000565969 475 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 VN1R107P-201ENST00000601784 209 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 AC018889.1-201ENST00000605372 397 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 AL359821.1-201ENST00000605519 182 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 AC064807.4-201ENST00000607201 407 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 AC104458.1-201ENST00000608243 463 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 RMST_3.1-201ENST00000611651 109 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 FAM157A-202ENST00000615155 405 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.87□□□□□ -2.11
SHROOM1Q2M3G4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 RNY3P3-201ENST00000363816 102 ntBASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-234P-201ENST00000365229 104 ntBASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-378P-201ENST00000384324 107 ntBASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 SNORD115-47-201ENST00000391226 86 ntBASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 BX510359.4-201ENST00000423750 193 ntBASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 AL359672.1-201ENST00000442302 409 ntBASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 snoU13.6-201ENST00000458785 104 ntBASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 AC092989.1-201ENST00000481235 277 ntBASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 AC091435.1-201ENST00000505442 584 ntBASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 EIF1P4-201ENST00000572664 335 ntBASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 AL359314.1-201ENST00000616913 261 ntBASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 SNORA43.4-201ENST00000629559 138 ntBASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 AL450472.1-202ENST00000637286 180 ntBASIC1.86□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-254P-201ENST00000363377 107 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 Y_RNA.256-201ENST00000364594 104 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 Y_RNA.402-201ENST00000383972 102 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-142P-201ENST00000384019 107 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-214P-201ENST00000384130 107 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-325P-201ENST00000411132 105 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 AP000275.1-201ENST00000411943 390 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 ARL5AP1-201ENST00000418991 388 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 RPL23AP95-201ENST00000426806 265 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 AC078809.1-201ENST00000427601 140 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 AL133396.1-201ENST00000432048 687 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 AC016632.1-201ENST00000503994 196 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 AC022447.4-201ENST00000504053 364 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 PTP4A1P4-201ENST00000512479 322 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-718P-201ENST00000516166 105 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 AC109635.3-201ENST00000529536 185 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 AC022254.1-201ENST00000567857 235 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 MIR3618-201ENST00000580330 88 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 MIR3136-201ENST00000583498 78 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 Z98751.3-201ENST00000604447 521 ntBASIC1.85□□□□□ -2.11
SHROOM1Q2M3G4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 Y_RNA.123-201ENST00000363338 102 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 RNU4-56P-201ENST00000364700 142 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 MIR521-1-201ENST00000384902 87 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 MIR181A1-201ENST00000385026 110 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 RN7SKP61-201ENST00000410642 295 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 AL590632.1-201ENST00000424289 371 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 HMGN2P26-201ENST00000463169 339 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 RPS29P27-201ENST00000463711 170 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 AC021146.2-201ENST00000504736 556 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 AC093259.1-201ENST00000509755 300 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-273P-201ENST00000516937 96 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 MRPS36P4-201ENST00000534436 298 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 MIR3923-201ENST00000579521 83 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 MIR3976-201ENST00000606807 139 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 uc_338.5-201ENST00000611839 155 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.84□□□□□ -2.11
SHROOM1Q2M3G4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
SHROOM1Q2M3G4 Y_RNA.9-201ENST00000362354 101 ntBASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 RNU6-227P-201ENST00000362865 103 ntBASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 SNORD32B-201ENST00000364460 84 ntBASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 Y_RNA.450-201ENST00000384198 113 ntBASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 SNORD14D-201ENST00000384390 87 ntBASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 MIR597-201ENST00000384968 97 ntBASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 MIR549A-201ENST00000385268 96 ntBASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 MIR208B-201ENST00000401172 77 ntBASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 CBX3P6-201ENST00000430257 527 ntBASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 PPP1R2P5-201ENST00000457256 603 ntBASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 RNU7-187P-201ENST00000458985 68 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms