Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 USP9YP22-201ENST00000438971 294 ntBASIC-1.18□□□□□ -2.6
TFF3Q07654 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-1.18□□□□□ -2.6
TFF3Q07654 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
TFF3Q07654 RNU6-1278P-201ENST00000516130 107 ntBASIC-1.18□□□□□ -2.6
TFF3Q07654 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-1.18□□□□□ -2.6
TFF3Q07654 AL391001.1-201ENST00000602747 715 ntBASIC-1.18□□□□□ -2.6
TFF3Q07654 AC098483.2-201ENST00000603158 454 ntBASIC-1.18□□□□□ -2.6
TFF3Q07654 AC104695.3-201ENST00000604052 296 ntBASIC-1.18□□□□□ -2.6
TFF3Q07654 RNU6-94P-201ENST00000607728 107 ntBASIC-1.18□□□□□ -2.6
TFF3Q07654 U6.99-201ENST00000637524 83 ntBASIC-1.18□□□□□ -2.6
TFF3Q07654 RNU6-655P-201ENST00000362858 107 ntBASIC-1.19□□□□□ -2.6
TFF3Q07654 RNU6-1280P-201ENST00000365211 107 ntBASIC-1.19□□□□□ -2.6
TFF3Q07654 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-1.19□□□□□ -2.6
TFF3Q07654 RNU6-1297P-201ENST00000384415 104 ntBASIC-1.19□□□□□ -2.6
TFF3Q07654 FCF1P10-201ENST00000407590 479 ntBASIC-1.19□□□□□ -2.6
TFF3Q07654 SNORD111-201ENST00000408139 94 ntBASIC-1.19□□□□□ -2.6
TFF3Q07654 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-1.19□□□□□ -2.6
TFF3Q07654 AC005042.3-201ENST00000453230 174 ntBASIC-1.19□□□□□ -2.6
TFF3Q07654 LINC01399-202ENST00000458450 244 ntBASIC-1.19□□□□□ -2.6
TFF3Q07654 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-1.19□□□□□ -2.6
TFF3Q07654 RNU4-49P-201ENST00000516080 140 ntBASIC-1.19□□□□□ -2.6
TFF3Q07654 AC040926.1-201ENST00000530195 238 ntBASIC-1.19□□□□□ -2.6
TFF3Q07654 AC093023.1-201ENST00000547375 507 ntBASIC-1.19□□□□□ -2.6
TFF3Q07654 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-1.19□□□□□ -2.6
TFF3Q07654 AC006504.8-201ENST00000621046 635 ntBASIC-1.19□□□□□ -2.6
TFF3Q07654 SCARNA4-202ENST00000625402 129 ntBASIC-1.19□□□□□ -2.6
TFF3Q07654 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.2□□□□□ -2.6
TFF3Q07654 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.2□□□□□ -2.6
TFF3Q07654 AL451046.2-201ENST00000403074 277 ntBASIC-1.2□□□□□ -2.6
TFF3Q07654 RNU6-994P-201ENST00000410507 111 ntBASIC-1.2□□□□□ -2.6
TFF3Q07654 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-1.2□□□□□ -2.6
TFF3Q07654 AC015724.1-201ENST00000478577 156 ntBASIC-1.2□□□□□ -2.6
TFF3Q07654 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.2□□□□□ -2.6
TFF3Q07654 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-1.2□□□□□ -2.6
TFF3Q07654 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.2□□□□□ -2.6
TFF3Q07654 MIR4436A-201ENST00000585278 85 ntBASIC-1.2□□□□□ -2.6
TFF3Q07654 AL159972.1-201ENST00000625150 448 ntBASIC-1.2□□□□□ -2.6
TFF3Q07654 AL162726.3-218ENST00000636401 95 ntBASIC-1.2□□□□□ -2.6
TFF3Q07654 RNU6-1210P-201ENST00000363775 107 ntBASIC-1.21□□□□□ -2.6
TFF3Q07654 Y_RNA.245-201ENST00000364493 95 ntBASIC-1.21□□□□□ -2.6
TFF3Q07654 AL079342.2-201ENST00000403367 482 ntBASIC-1.21□□□□□ -2.6
TFF3Q07654 DNAJA1P2-201ENST00000421360 1197 ntBASIC-1.21□□□□□ -2.6
TFF3Q07654 RPP40P1-201ENST00000426762 456 ntBASIC-1.21□□□□□ -2.6
TFF3Q07654 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-1.21□□□□□ -2.6
TFF3Q07654 TPT1P7-201ENST00000458300 517 ntBASIC-1.21□□□□□ -2.6
TFF3Q07654 AC013828.1-201ENST00000481845 158 ntBASIC-1.21□□□□□ -2.6
TFF3Q07654 RNU6-180P-201ENST00000516697 61 ntBASIC-1.21□□□□□ -2.6
TFF3Q07654 AP002001.1-203ENST00000534002 267 ntBASIC-1.21□□□□□ -2.6
TFF3Q07654 AC004832.4-201ENST00000608952 331 ntBASIC-1.21□□□□□ -2.6
TFF3Q07654 MIR1-1-201ENST00000362147 71 ntBASIC-1.22□□□□□ -2.6
TFF3Q07654 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.22□□□□□ -2.6
TFF3Q07654 RNU2-3P-201ENST00000410144 191 ntBASIC-1.22□□□□□ -2.6
TFF3Q07654 RNU6-57P-201ENST00000411348 103 ntBASIC-1.22□□□□□ -2.6
TFF3Q07654 MRPS10P2-201ENST00000431226 381 ntBASIC-1.22□□□□□ -2.6
TFF3Q07654 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-1.22□□□□□ -2.6
TFF3Q07654 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-1.22□□□□□ -2.6
TFF3Q07654 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-1.22□□□□□ -2.6
TFF3Q07654 AC104629.2-201ENST00000468627 598 ntBASIC-1.22□□□□□ -2.6
TFF3Q07654 AC109445.1-201ENST00000512356 383 ntBASIC-1.22□□□□□ -2.6
TFF3Q07654 AC093303.1-201ENST00000514549 295 ntBASIC-1.22□□□□□ -2.6
TFF3Q07654 RNU6-390P-201ENST00000516259 103 ntBASIC-1.22□□□□□ -2.6
TFF3Q07654 AP003400.6-201ENST00000624698 740 ntBASIC-1.22□□□□□ -2.6
TFF3Q07654 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-1.22□□□□□ -2.6
TFF3Q07654 RNU4-76P-201ENST00000364509 141 ntBASIC-1.23□□□□□ -2.61
TFF3Q07654 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-1.23□□□□□ -2.61
TFF3Q07654 TAF13P2-201ENST00000416876 286 ntBASIC-1.23□□□□□ -2.61
TFF3Q07654 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-1.23□□□□□ -2.61
TFF3Q07654 AC093019.1-201ENST00000443135 252 ntBASIC-1.23□□□□□ -2.61
TFF3Q07654 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-1.23□□□□□ -2.61
TFF3Q07654 SNORA27.4-201ENST00000516650 95 ntBASIC-1.23□□□□□ -2.61
TFF3Q07654 AC023442.1-201ENST00000531247 422 ntBASIC-1.23□□□□□ -2.61
TFF3Q07654 HMGB1P51-201ENST00000605166 638 ntBASIC-1.23□□□□□ -2.61
TFF3Q07654 RNU6-24P-201ENST00000384440 107 ntBASIC-1.24□□□□□ -2.61
TFF3Q07654 AL603865.2-201ENST00000401679 213 ntBASIC-1.24□□□□□ -2.61
TFF3Q07654 RNA5SP163-201ENST00000410304 99 ntBASIC-1.24□□□□□ -2.61
TFF3Q07654 Y_RNA.597-201ENST00000410463 100 ntBASIC-1.24□□□□□ -2.61
TFF3Q07654 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-1.24□□□□□ -2.61
TFF3Q07654 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-1.24□□□□□ -2.61
TFF3Q07654 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-1.24□□□□□ -2.61
TFF3Q07654 STAG3L5P-204ENST00000443759 179 ntBASIC-1.24□□□□□ -2.61
TFF3Q07654 USP9YP29-201ENST00000445112 563 ntBASIC-1.24□□□□□ -2.61
TFF3Q07654 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-1.24□□□□□ -2.61
TFF3Q07654 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.24□□□□□ -2.61
TFF3Q07654 TPRKBP2-201ENST00000565969 475 ntBASIC-1.24□□□□□ -2.61
TFF3Q07654 MIR548AO-201ENST00000579992 96 ntBASIC-1.24□□□□□ -2.61
TFF3Q07654 MIR4300-201ENST00000581016 96 ntBASIC-1.24□□□□□ -2.61
TFF3Q07654 AC007014.2-201ENST00000615581 479 ntBASIC-1.24□□□□□ -2.61
TFF3Q07654 AC106754.2-201ENST00000623006 233 ntBASIC-1.24□□□□□ -2.61
TFF3Q07654 AL590396.4-201ENST00000636779 956 ntBASIC-1.24□□□□□ -2.61
TFF3Q07654 DLEU2_6.3-201ENST00000340052 136 ntBASIC-1.25□□□□□ -2.61
TFF3Q07654 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.25□□□□□ -2.61
TFF3Q07654 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.25□□□□□ -2.61
TFF3Q07654 RNU6-1031P-201ENST00000384773 107 ntBASIC-1.25□□□□□ -2.61
TFF3Q07654 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-1.25□□□□□ -2.61
TFF3Q07654 USP9YP25-201ENST00000457708 443 ntBASIC-1.25□□□□□ -2.61
TFF3Q07654 snoU13.14-201ENST00000459372 104 ntBASIC-1.25□□□□□ -2.61
TFF3Q07654 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.25□□□□□ -2.61
TFF3Q07654 NDUFA4P2-201ENST00000489989 244 ntBASIC-1.25□□□□□ -2.61
TFF3Q07654 RNU7-129P-201ENST00000516128 62 ntBASIC-1.25□□□□□ -2.61
TFF3Q07654 AP003716.2-201ENST00000528260 108 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms