Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL021368.1-201ENST00000607490 540 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 AC116165.2-201ENST00000616705 206 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 MIR6734-201ENST00000621166 68 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 AL603839.4-201ENST00000624658 1005 ntBASIC0.37□□□□□ -2.35
H3F3AP84243 MIR10B-201ENST00000385011 110 ntBASIC0.36□□□□□ -2.35
H3F3AP84243 AL035398.1-201ENST00000430869 322 ntBASIC0.36□□□□□ -2.35
H3F3AP84243 HSFY7P-201ENST00000432672 318 ntBASIC0.36□□□□□ -2.35
H3F3AP84243 AC002486.1-201ENST00000435098 391 ntBASIC0.36□□□□□ -2.35
H3F3AP84243 HSFY8P-201ENST00000437934 318 ntBASIC0.36□□□□□ -2.35
H3F3AP84243 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.36□□□□□ -2.35
H3F3AP84243 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.36□□□□□ -2.35
H3F3AP84243 AL162395.1-201ENST00000457882 422 ntBASIC0.36□□□□□ -2.35
H3F3AP84243 RNU6-1132P-201ENST00000459214 107 ntBASIC0.36□□□□□ -2.35
H3F3AP84243 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.36□□□□□ -2.35
H3F3AP84243 RNU4-57P-201ENST00000515980 135 ntBASIC0.36□□□□□ -2.35
H3F3AP84243 AC007834.2-201ENST00000536310 343 ntBASIC0.36□□□□□ -2.35
H3F3AP84243 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.36□□□□□ -2.35
H3F3AP84243 AC080078.2-201ENST00000603766 501 ntBASIC0.36□□□□□ -2.35
H3F3AP84243 AL158042.1-201ENST00000605338 460 ntBASIC0.36□□□□□ -2.35
H3F3AP84243 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.36□□□□□ -2.35
H3F3AP84243 AC019226.2-201ENST00000625973 424 ntBASIC0.36□□□□□ -2.35
H3F3AP84243 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.36□□□□□ -2.35
H3F3AP84243 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.36□□□□□ -2.35
H3F3AP84243 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
H3F3AP84243 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.36□□□□□ -2.35
H3F3AP84243 RNU6-428P-201ENST00000362942 107 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 SNORD32A-201ENST00000364805 84 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 Y_RNA.355-201ENST00000365462 98 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 RNU6-809P-201ENST00000384461 107 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 RNU6-417P-201ENST00000384712 107 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 MIR300-201ENST00000401138 83 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 MIR1283-1-201ENST00000408494 87 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 RNU2-39P-201ENST00000410604 198 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.35□□□□□ -2.35
H3F3AP84243 MTATP6P20-201ENST00000414147 562 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 AC137499.1-201ENST00000427602 88 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 TIMM9P3-201ENST00000428659 274 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 AC119618.1-201ENST00000434191 222 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 RPEP5-201ENST00000441137 268 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.35□□□□□ -2.35
H3F3AP84243 AC016717.1-201ENST00000448918 286 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 AL133217.1-201ENST00000450980 425 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.35□□□□□ -2.35
H3F3AP84243 AC016632.1-201ENST00000503994 196 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.35□□□□□ -2.35
H3F3AP84243 RNU6-1146P-201ENST00000516282 102 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 SNORA31.10-201ENST00000516482 106 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 RNU6-567P-201ENST00000516746 107 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.35□□□□□ -2.35
H3F3AP84243 AC092451.2-201ENST00000538746 658 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 AC018659.1-201ENST00000551083 169 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 AC012557.2-201ENST00000605919 418 ntBASIC0.35□□□□□ -2.35
H3F3AP84243 Y_RNA.504-201ENST00000384481 104 ntBASIC0.34□□□□□ -2.36
H3F3AP84243 RN7SKP200-201ENST00000410564 320 ntBASIC0.34□□□□□ -2.36
H3F3AP84243 AC092423.1-201ENST00000430165 186 ntBASIC0.34□□□□□ -2.36
H3F3AP84243 AL606517.2-201ENST00000442855 241 ntBASIC0.34□□□□□ -2.36
H3F3AP84243 SRRM1P2-201ENST00000464531 1192 ntBASIC0.34□□□□□ -2.36
H3F3AP84243 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.34□□□□□ -2.36
H3F3AP84243 AL390123.1-201ENST00000603216 237 ntBASIC0.34□□□□□ -2.36
H3F3AP84243 AC009994.1-201ENST00000606889 253 ntBASIC0.34□□□□□ -2.36
H3F3AP84243 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.34□□□□□ -2.36
H3F3AP84243 AC243829.3-201ENST00000622177 108 ntBASIC0.34□□□□□ -2.36
H3F3AP84243 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.34□□□□□ -2.36
H3F3AP84243 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.34□□□□□ -2.36
H3F3AP84243 Y_RNA.122-201ENST00000363331 96 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 RNU4-76P-201ENST00000364509 141 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 Y_RNA.324-201ENST00000365165 102 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 RNU6-61P-201ENST00000365528 109 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 SNORD41-201ENST00000386967 70 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 AC244023.1-201ENST00000426884 112 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 AL133396.1-201ENST00000432048 687 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 NDUFA5P4-201ENST00000436704 385 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 FABP5P4-201ENST00000437203 171 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 AL358794.1-201ENST00000445689 381 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 RNU6-948P-201ENST00000516374 107 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 AC109479.2-201ENST00000517842 174 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
H3F3AP84243 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.33□□□□□ -2.36
H3F3AP84243 AC024995.1-201ENST00000523014 93 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 Z83818.1-201ENST00000603584 150 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 AC242498.1-201ENST00000604134 111 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 AL356157.2-201ENST00000605122 111 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 AC243994.1-201ENST00000618627 109 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 AC006001.4-201ENST00000622243 395 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 AC134026.1-201ENST00000623249 2239 ntBASIC0.33□□□□□ -2.36
H3F3AP84243 RNU6-1335P-201ENST00000365426 107 ntBASIC0.32□□□□□ -2.36
H3F3AP84243 RNU6-45P-201ENST00000384471 107 ntBASIC0.32□□□□□ -2.36
H3F3AP84243 RNA5SP467-201ENST00000391274 118 ntBASIC0.32□□□□□ -2.36
H3F3AP84243 AL355796.1-201ENST00000406706 323 ntBASIC0.32□□□□□ -2.36
H3F3AP84243 MIR1253-201ENST00000408273 105 ntBASIC0.32□□□□□ -2.36
H3F3AP84243 AC090960.1-201ENST00000421072 306 ntBASIC0.32□□□□□ -2.36
H3F3AP84243 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.32□□□□□ -2.36
H3F3AP84243 AC007283.2-201ENST00000424739 197 ntBASIC0.32□□□□□ -2.36
H3F3AP84243 RPS24P1-201ENST00000438550 371 ntBASIC0.32□□□□□ -2.36
H3F3AP84243 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.32□□□□□ -2.36
H3F3AP84243 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.32□□□□□ -2.36
H3F3AP84243 RPL39P39-201ENST00000455840 151 ntBASIC0.32□□□□□ -2.36
H3F3AP84243 RNU7-90P-201ENST00000459216 62 ntBASIC0.32□□□□□ -2.36
H3F3AP84243 RNU7-21P-201ENST00000459430 62 ntBASIC0.32□□□□□ -2.36
H3F3AP84243 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms