Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC092634.7-201ENST00000621022 103 ntBASIC-0.32□□□□□ -2.46
UBA52P62987 AL078595.3-201ENST00000623815 1166 ntBASIC-0.32□□□□□ -2.46
UBA52P62987 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.32□□□□□ -2.46
UBA52P62987 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
UBA52P62987 SNORD56.1-201ENST00000362913 68 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 MIR19A-201ENST00000384878 82 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 MIR660-201ENST00000385235 97 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 RNA5SP323-201ENST00000391094 133 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 RN7SKP266-201ENST00000410232 287 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 VPS26BP1-201ENST00000417155 755 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 MTCO2P34-201ENST00000421994 607 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.33□□□□□ -2.46
UBA52P62987 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.33□□□□□ -2.46
UBA52P62987 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.33□□□□□ -2.46
UBA52P62987 MTND4P25-201ENST00000441039 533 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.33□□□□□ -2.46
UBA52P62987 OR9P1P-201ENST00000496431 281 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
UBA52P62987 AC022868.1-201ENST00000517767 391 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 MTND1P36-201ENST00000522384 936 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
UBA52P62987 AC026371.1-201ENST00000551867 419 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 MTND1P15-201ENST00000579262 949 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 MIR3146-201ENST00000580367 79 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 RPL21P136-201ENST00000605378 396 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 AC104073.3-201ENST00000610942 955 ntBASIC-0.33□□□□□ -2.46
UBA52P62987 MIR18A-201ENST00000362310 71 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 SNORD95.1-201ENST00000364099 68 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 RNU6-654P-201ENST00000364373 107 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 RNU6-701P-201ENST00000384059 107 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 RNU6-30P-201ENST00000384561 107 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 MIR573-201ENST00000384964 99 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 AL451046.2-201ENST00000403074 277 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 MIR1827-201ENST00000408549 66 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 MTND2P9-201ENST00000422293 931 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.34□□□□□ -2.46
UBA52P62987 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.34□□□□□ -2.46
UBA52P62987 RPS3AP17-201ENST00000472594 777 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.34□□□□□ -2.46
UBA52P62987 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.34□□□□□ -2.46
UBA52P62987 RNU6-914P-201ENST00000516749 109 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 AC023632.1-201ENST00000518463 375 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.34□□□□□ -2.46
UBA52P62987 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.34□□□□□ -2.46
UBA52P62987 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.34□□□□□ -2.46
UBA52P62987 AC012507.3-201ENST00000603556 477 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 RNU6-94P-201ENST00000607728 107 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 AL031667.3-201ENST00000620124 655 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 MTND5P42-201ENST00000637720 498 ntBASIC-0.34□□□□□ -2.46
UBA52P62987 MIR103A2-201ENST00000362154 78 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 RNA5SP517-201ENST00000364724 117 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 RNU6-46P-201ENST00000383860 107 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 RNU6-39P-201ENST00000384344 107 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 MTCYBP2-201ENST00000407745 171 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 RN7SKP142-201ENST00000411236 328 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.35□□□□□ -2.47
UBA52P62987 AL121578.1-201ENST00000428051 892 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 TIMM9P3-201ENST00000428659 274 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.35□□□□□ -2.47
UBA52P62987 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.35□□□□□ -2.47
UBA52P62987 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.35□□□□□ -2.47
UBA52P62987 AC104136.1-201ENST00000512969 394 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 AC116347.2-201ENST00000514912 523 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 AP003716.2-201ENST00000528260 108 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.35□□□□□ -2.47
UBA52P62987 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.35□□□□□ -2.47
UBA52P62987 AP000676.3-201ENST00000623299 569 ntBASIC-0.35□□□□□ -2.47
UBA52P62987 RNU6-199P-201ENST00000362954 107 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 RNU6-395P-201ENST00000365662 106 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 RNA5SP451-201ENST00000410588 110 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 SNORA40.8-201ENST00000411034 126 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 AL627311.1-201ENST00000431514 115 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 MTCYBP39-201ENST00000437562 491 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 AC007000.2-201ENST00000442564 487 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 MRPL42P4-201ENST00000453267 443 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.36□□□□□ -2.47
UBA52P62987 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.36□□□□□ -2.47
UBA52P62987 RNU7-14P-201ENST00000459331 62 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.36□□□□□ -2.47
UBA52P62987 SCARNA8-201ENST00000515924 131 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 AC112693.2-201ENST00000556538 232 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 MIR4778-201ENST00000577635 80 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 AC110760.3-201ENST00000598794 467 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 AC022217.4-201ENST00000604389 163 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 SEPT14P17-201ENST00000617978 177 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 AC131159.1-201ENST00000621854 213 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 SCARNA4-202ENST00000625402 129 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 BX322639.1-202ENST00000423987 2213 ntBASIC-0.36□□□□□ -2.47
UBA52P62987 RNU6-744P-201ENST00000365557 107 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms