Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.91□□□□□ -2.1
RIPK4P57078 SNORA19.2-201ENST00000516013 114 ntBASIC1.91□□□□□ -2.1
RIPK4P57078 RNU6-277P-201ENST00000516272 106 ntBASIC1.91□□□□□ -2.1
RIPK4P57078 RNU6-1332P-201ENST00000516666 104 ntBASIC1.91□□□□□ -2.1
RIPK4P57078 RNU6-256P-201ENST00000516747 97 ntBASIC1.91□□□□□ -2.1
RIPK4P57078 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.91□□□□□ -2.1
RIPK4P57078 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.91□□□□□ -2.1
RIPK4P57078 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.91□□□□□ -2.1
RIPK4P57078 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.91□□□□□ -2.1
RIPK4P57078 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.91□□□□□ -2.1
RIPK4P57078 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.91□□□□□ -2.1
RIPK4P57078 AC073410.2-201ENST00000603240 332 ntBASIC1.91□□□□□ -2.1
RIPK4P57078 RNU6-85P-201ENST00000605989 107 ntBASIC1.91□□□□□ -2.1
RIPK4P57078 AL132765.2-201ENST00000610812 351 ntBASIC1.91□□□□□ -2.1
RIPK4P57078 AL138726.1-201ENST00000614873 333 ntBASIC1.91□□□□□ -2.1
RIPK4P57078 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.91□□□□□ -2.1
RIPK4P57078 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RIPK4P57078 MIR378A-201ENST00000362177 66 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 RNU6-529P-201ENST00000363383 104 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 Y_RNA.135-201ENST00000363439 95 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 Y_RNA.166-201ENST00000363730 102 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 Y_RNA.212-201ENST00000364177 102 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 SNORD116-11-201ENST00000383882 92 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 Y_RNA.474-201ENST00000384341 102 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 MIR186-201ENST00000384988 86 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 AL078595.1-201ENST00000404458 226 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 RN7SKP158-201ENST00000410453 326 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 HMGB1P18-201ENST00000438801 619 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.9□□□□□ -2.11
RIPK4P57078 MTCYBP40-201ENST00000509390 1135 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 RPL39P5-202ENST00000512505 151 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 Y_RNA.682-201ENST00000516457 100 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 RNU6-323P-201ENST00000521915 107 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.9□□□□□ -2.11
RIPK4P57078 CYCSP27-201ENST00000527643 293 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 AC025423.5-201ENST00000550230 219 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 MIR3941-201ENST00000582572 103 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 AL109918.3-201ENST00000603072 338 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 AL355297.2-201ENST00000604792 129 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 RMST_6.1-201ENST00000611980 203 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 uc_338.15-201ENST00000615470 191 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 AC104985.2-201ENST00000620598 500 ntBASIC1.9□□□□□ -2.11
RIPK4P57078 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.89□□□□□ -2.11
RIPK4P57078 SNORD113-7-201ENST00000363762 77 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 Y_RNA.263-201ENST00000364659 114 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 Y_RNA.480-201ENST00000384364 102 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 SNORD116-20-201ENST00000384529 92 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 RNU2-23P-201ENST00000410545 195 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 RNU2-41P-201ENST00000410991 178 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 AC009161.1-201ENST00000417306 376 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 RPS3AP52-201ENST00000435639 297 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.89□□□□□ -2.11
RIPK4P57078 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.89□□□□□ -2.11
RIPK4P57078 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.89□□□□□ -2.11
RIPK4P57078 RNU6-566P-201ENST00000516790 107 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 AC105029.1-201ENST00000520250 669 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 AC104576.1-201ENST00000524225 88 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 COPS8P3-201ENST00000526024 482 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.89□□□□□ -2.11
RIPK4P57078 AC093027.1-201ENST00000546698 429 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 IMMP1LP2-201ENST00000552954 492 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 DNAJC19P9-201ENST00000555084 351 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 MIR4287-201ENST00000579398 78 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.89□□□□□ -2.11
RIPK4P57078 FGF7P1-201ENST00000582820 288 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 AC023043.2-201ENST00000589678 1026 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 ELOCP5-201ENST00000604924 333 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 AL512598.1-201ENST00000610158 273 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 AC093913.1-201ENST00000614178 329 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 AC008121.3-201ENST00000618726 433 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 Z69720.2-201ENST00000624755 279 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 TPTEP1-208ENST00000636884 213 ntBASIC1.89□□□□□ -2.11
RIPK4P57078 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.89□□□□□ -2.11
RIPK4P57078 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RIPK4P57078 Y_RNA.58-201ENST00000362807 102 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 RNU6-428P-201ENST00000362942 107 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 Y_RNA.154-201ENST00000363624 102 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 RNU4-42P-201ENST00000364738 142 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 RNY3P1-201ENST00000365085 102 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 Y_RNA.356-201ENST00000365475 113 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 RNY3-201ENST00000365484 102 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 Y_RNA.490-201ENST00000384413 102 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 MIR561-201ENST00000385216 97 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 RNU6-1009P-201ENST00000390996 107 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 MIR548K-201ENST00000408406 116 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 RNU6-1304P-201ENST00000411374 106 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.88□□□□□ -2.11
RIPK4P57078 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.88□□□□□ -2.11
RIPK4P57078 AC009238.1-201ENST00000442165 424 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.88□□□□□ -2.11
RIPK4P57078 AC009237.6-201ENST00000446969 424 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.88□□□□□ -2.11
RIPK4P57078 AC055731.1-201ENST00000474387 401 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 AC018868.1-201ENST00000491307 315 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.88□□□□□ -2.11
RIPK4P57078 Y_RNA.675-201ENST00000516389 149 ntBASIC1.88□□□□□ -2.11
RIPK4P57078 Y_RNA.691-201ENST00000516611 103 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms