Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MIR518C-201ENST00000384822 101 ntBASIC2.26□□□□□ -2.05
CLDN20P56880 RNU6-1093P-201ENST00000391194 107 ntBASIC2.26□□□□□ -2.05
CLDN20P56880 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CLDN20P56880 Y_RNA.597-201ENST00000410463 100 ntBASIC2.26□□□□□ -2.05
CLDN20P56880 CBX3P6-201ENST00000430257 527 ntBASIC2.26□□□□□ -2.05
CLDN20P56880 RPL23AP94-201ENST00000512518 302 ntBASIC2.26□□□□□ -2.05
CLDN20P56880 RNU6-976P-201ENST00000516086 111 ntBASIC2.26□□□□□ -2.05
CLDN20P56880 RNU6-1198P-201ENST00000516904 67 ntBASIC2.26□□□□□ -2.05
CLDN20P56880 Y_RNA.706-201ENST00000516933 99 ntBASIC2.26□□□□□ -2.05
CLDN20P56880 AC018630.3-201ENST00000542637 96 ntBASIC2.26□□□□□ -2.05
CLDN20P56880 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.26□□□□□ -2.05
CLDN20P56880 AL355297.2-201ENST00000604792 129 ntBASIC2.26□□□□□ -2.05
CLDN20P56880 AC090971.5-201ENST00000621102 293 ntBASIC2.26□□□□□ -2.05
CLDN20P56880 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.26□□□□□ -2.05
CLDN20P56880 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.26□□□□□ -2.05
CLDN20P56880 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.26□□□□□ -2.05
CLDN20P56880 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CLDN20P56880 RNU6-137P-201ENST00000363680 108 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 SNORD115-8-201ENST00000363856 82 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 Y_RNA.197-201ENST00000364004 102 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 RNU6-944P-201ENST00000364023 107 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 SNORD32B-201ENST00000364460 84 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 RNU4-76P-201ENST00000364509 141 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 Y_RNA.813-201ENST00000364639 102 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 RNU6-99P-201ENST00000364721 107 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 SNORD115-38-201ENST00000365037 82 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 SNORD42.2-201ENST00000365570 69 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 Y_RNA.463-201ENST00000384271 102 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 AC009963.1-201ENST00000417265 157 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN20P56880 Y_RNA.639-201ENST00000458981 102 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 AC007215.1-201ENST00000464893 276 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 TOMM22P6-201ENST00000465035 409 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.25□□□□□ -2.05
CLDN20P56880 AL355802.3-201ENST00000607571 545 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 U4.3-201ENST00000621047 82 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.25□□□□□ -2.05
CLDN20P56880 IGHVIII-44-202ENST00000636235 289 ntBASIC2.25□□□□□ -2.05
CLDN20P56880 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.25□□□□□ -2.05
CLDN20P56880 Z82209.1-201ENST00000422141 2135 ntBASIC2.24□□□□□ -2.05
CLDN20P56880 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.24□□□□□ -2.05
CLDN20P56880 RNU4-82P-201ENST00000362443 140 ntBASIC2.24□□□□□ -2.05
CLDN20P56880 Y_RNA.319-201ENST00000365138 92 ntBASIC2.24□□□□□ -2.05
CLDN20P56880 Y_RNA.395-201ENST00000383945 109 ntBASIC2.24□□□□□ -2.05
CLDN20P56880 SNORA12-201ENST00000391162 147 ntBASIC2.24□□□□□ -2.05
CLDN20P56880 MIR190B-201ENST00000401119 79 ntBASIC2.24□□□□□ -2.05
CLDN20P56880 RNU6-1156P-201ENST00000410365 100 ntBASIC2.24□□□□□ -2.05
CLDN20P56880 AC092423.1-201ENST00000430165 186 ntBASIC2.24□□□□□ -2.05
CLDN20P56880 AC099799.1-201ENST00000439809 192 ntBASIC2.24□□□□□ -2.05
CLDN20P56880 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.24□□□□□ -2.05
CLDN20P56880 AL513328.1-201ENST00000446460 224 ntBASIC2.24□□□□□ -2.05
CLDN20P56880 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN20P56880 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN20P56880 RNA5SP54-201ENST00000516951 92 ntBASIC2.24□□□□□ -2.05
CLDN20P56880 RNU6-699P-201ENST00000517081 110 ntBASIC2.24□□□□□ -2.05
CLDN20P56880 HSPE1P18-201ENST00000517602 280 ntBASIC2.24□□□□□ -2.05
CLDN20P56880 AC027288.2-201ENST00000553028 243 ntBASIC2.24□□□□□ -2.05
CLDN20P56880 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.24□□□□□ -2.05
CLDN20P56880 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.24□□□□□ -2.05
CLDN20P56880 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CLDN20P56880 AC007336.1-201ENST00000576365 3828 ntBASIC2.24□□□□□ -2.05
CLDN20P56880 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN20P56880 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN20P56880 AC005336.3-201ENST00000623833 2679 ntBASIC2.23□□□□□ -2.05
CLDN20P56880 RNU6-541P-201ENST00000384709 110 ntBASIC2.23□□□□□ -2.05
CLDN20P56880 MIR625-201ENST00000385047 85 ntBASIC2.23□□□□□ -2.05
CLDN20P56880 MIR561-201ENST00000385216 97 ntBASIC2.23□□□□□ -2.05
CLDN20P56880 MIR1294-201ENST00000408503 142 ntBASIC2.23□□□□□ -2.05
CLDN20P56880 SUMO1P4-201ENST00000429430 302 ntBASIC2.23□□□□□ -2.05
CLDN20P56880 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.23□□□□□ -2.05
CLDN20P56880 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN20P56880 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN20P56880 AC090096.1-201ENST00000489168 390 ntBASIC2.23□□□□□ -2.05
CLDN20P56880 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN20P56880 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.23□□□□□ -2.05
CLDN20P56880 RNU6-58P-201ENST00000517143 103 ntBASIC2.23□□□□□ -2.05
CLDN20P56880 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.23□□□□□ -2.05
CLDN20P56880 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN20P56880 CBX3P7-201ENST00000532876 502 ntBASIC2.23□□□□□ -2.05
CLDN20P56880 AC026470.2-201ENST00000561492 181 ntBASIC2.23□□□□□ -2.05
CLDN20P56880 AC090517.1-201ENST00000569307 266 ntBASIC2.23□□□□□ -2.05
CLDN20P56880 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN20P56880 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN20P56880 RPL17P51-201ENST00000605218 238 ntBASIC2.23□□□□□ -2.05
CLDN20P56880 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN20P56880 U4atac.1-201ENST00000618345 95 ntBASIC2.23□□□□□ -2.05
CLDN20P56880 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN20P56880 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.23□□□□□ -2.05
CLDN20P56880 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
CLDN20P56880 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN20P56880 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN20P56880 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN20P56880 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN20P56880 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN20P56880 MIR369-201ENST00000362155 70 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 RNU6-874P-201ENST00000362390 105 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 Y_RNA.112-201ENST00000363250 102 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 RNU1-23P-201ENST00000363361 144 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 Y_RNA.252-201ENST00000364556 101 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms