Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 Y_RNA.132-201ENST00000363421 102 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 RNU6-266P-201ENST00000364225 107 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 SNORA63D-201ENST00000364359 132 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 RNU4-48P-201ENST00000365559 182 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 RNU6-877P-201ENST00000383868 107 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 RNU6-331P-201ENST00000384724 107 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 SNORA40.3-201ENST00000390964 122 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 SNORA16.2-201ENST00000390991 127 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 MTCO1P21-201ENST00000416634 589 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 MTCO3P29-201ENST00000432119 779 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 RPL30P7-201ENST00000479312 323 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 AC008628.2-201ENST00000502605 298 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 AC079140.5-201ENST00000507882 310 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.09□□□□□ -2.23
CLDN6P56747 RNU6-113P-201ENST00000516653 101 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.09□□□□□ -2.23
CLDN6P56747 AC015688.6-201ENST00000577737 104 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 AP001836.1-201ENST00000604675 523 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CLDN6P56747 AP001506.1-201ENST00000615444 211 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 AF246928.1-201ENST00000623768 87 ntBASIC1.09□□□□□ -2.23
CLDN6P56747 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.09□□□□□ -2.23
CLDN6P56747 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
CLDN6P56747 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CLDN6P56747 SNORA25.8-201ENST00000364831 128 ntBASIC1.08□□□□□ -2.24
CLDN6P56747 RNU6-1127P-201ENST00000384580 107 ntBASIC1.08□□□□□ -2.24
CLDN6P56747 AL031577.2-201ENST00000404133 280 ntBASIC1.08□□□□□ -2.24
CLDN6P56747 AL161935.2-201ENST00000414627 60 ntBASIC1.08□□□□□ -2.24
CLDN6P56747 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.08□□□□□ -2.24
CLDN6P56747 AC010099.3-201ENST00000423896 409 ntBASIC1.08□□□□□ -2.24
CLDN6P56747 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.08□□□□□ -2.24
CLDN6P56747 USP9YP28-201ENST00000435142 589 ntBASIC1.08□□□□□ -2.24
CLDN6P56747 AL033528.1-201ENST00000453780 140 ntBASIC1.08□□□□□ -2.24
CLDN6P56747 RNU7-125P-201ENST00000458760 62 ntBASIC1.08□□□□□ -2.24
CLDN6P56747 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.08□□□□□ -2.24
CLDN6P56747 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.08□□□□□ -2.24
CLDN6P56747 AC090115.3-201ENST00000553218 849 ntBASIC1.08□□□□□ -2.24
CLDN6P56747 AP003465.2-201ENST00000602571 373 ntBASIC1.08□□□□□ -2.24
CLDN6P56747 AC009994.1-201ENST00000606889 253 ntBASIC1.08□□□□□ -2.24
CLDN6P56747 MIR373-201ENST00000362273 69 ntBASIC1.07□□□□□ -2.24
CLDN6P56747 RNU6-1065P-201ENST00000384513 106 ntBASIC1.07□□□□□ -2.24
CLDN6P56747 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.07□□□□□ -2.24
CLDN6P56747 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.07□□□□□ -2.24
CLDN6P56747 AC069257.2-201ENST00000441819 155 ntBASIC1.07□□□□□ -2.24
CLDN6P56747 SCARNA18-201ENST00000459004 134 ntBASIC1.07□□□□□ -2.24
CLDN6P56747 RNU6-1132P-201ENST00000459214 107 ntBASIC1.07□□□□□ -2.24
CLDN6P56747 snoU13.27-201ENST00000459278 104 ntBASIC1.07□□□□□ -2.24
CLDN6P56747 AC091435.1-201ENST00000505442 584 ntBASIC1.07□□□□□ -2.24
CLDN6P56747 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CLDN6P56747 RNU6-856P-201ENST00000516959 98 ntBASIC1.07□□□□□ -2.24
CLDN6P56747 RNU6-232P-201ENST00000517144 64 ntBASIC1.07□□□□□ -2.24
CLDN6P56747 AC069113.1-201ENST00000517763 267 ntBASIC1.07□□□□□ -2.24
CLDN6P56747 RRN3P3-201ENST00000549207 578 ntBASIC1.07□□□□□ -2.24
CLDN6P56747 AC009094.1-201ENST00000564443 426 ntBASIC1.07□□□□□ -2.24
CLDN6P56747 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.07□□□□□ -2.24
CLDN6P56747 AC011458.1-201ENST00000604034 617 ntBASIC1.07□□□□□ -2.24
CLDN6P56747 AL355802.3-201ENST00000607571 545 ntBASIC1.07□□□□□ -2.24
CLDN6P56747 AC005520.5-201ENST00000613926 164 ntBASIC1.07□□□□□ -2.24
CLDN6P56747 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
CLDN6P56747 RNU6-456P-201ENST00000384493 107 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 RNU6-939P-201ENST00000384634 107 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 RNU6-1105P-201ENST00000384774 107 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 POLR2J4-204ENST00000418424 324 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 EIF1P1-201ENST00000421436 341 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.06□□□□□ -2.24
CLDN6P56747 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.06□□□□□ -2.24
CLDN6P56747 AC022364.2-201ENST00000457963 554 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.06□□□□□ -2.24
CLDN6P56747 CBX3P8-201ENST00000532412 525 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.06□□□□□ -2.24
CLDN6P56747 CYP3A52P-201ENST00000563326 91 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 AGGF1P4-201ENST00000568249 801 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 AC245014.2-201ENST00000603689 287 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 AC016727.2-201ENST00000603988 621 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 AC246785.4-201ENST00000605374 287 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 CTHRC1P1-201ENST00000605383 469 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 AC064807.4-201ENST00000607201 407 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 AC008147.4-201ENST00000617570 1204 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 AL136221.1-201ENST00000621449 509 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 AC079248.2-201ENST00000623779 326 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 SNORA43.4-201ENST00000629559 138 ntBASIC1.06□□□□□ -2.24
CLDN6P56747 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CLDN6P56747 RNA5SP327-201ENST00000362494 101 ntBASIC1.05□□□□□ -2.24
CLDN6P56747 RNU6-545P-201ENST00000362681 104 ntBASIC1.05□□□□□ -2.24
CLDN6P56747 RNU6-553P-201ENST00000364047 96 ntBASIC1.05□□□□□ -2.24
CLDN6P56747 RNU1-139P-201ENST00000391307 165 ntBASIC1.05□□□□□ -2.24
CLDN6P56747 AL117342.1-201ENST00000404861 406 ntBASIC1.05□□□□□ -2.24
CLDN6P56747 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.05□□□□□ -2.24
CLDN6P56747 AC012306.1-201ENST00000423267 114 ntBASIC1.05□□□□□ -2.24
CLDN6P56747 TOMM22P2-201ENST00000430735 237 ntBASIC1.05□□□□□ -2.24
CLDN6P56747 RNU6-759P-201ENST00000516740 103 ntBASIC1.05□□□□□ -2.24
CLDN6P56747 SNORA18.6-201ENST00000516792 115 ntBASIC1.05□□□□□ -2.24
CLDN6P56747 RAB11AP2-201ENST00000545905 639 ntBASIC1.05□□□□□ -2.24
CLDN6P56747 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.05□□□□□ -2.24
CLDN6P56747 MIR5000-201ENST00000577717 103 ntBASIC1.05□□□□□ -2.24
CLDN6P56747 AC064872.1-201ENST00000604823 1072 ntBASIC1.05□□□□□ -2.24
CLDN6P56747 AC126177.8-201ENST00000618339 1015 ntBASIC1.05□□□□□ -2.24
CLDN6P56747 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CLDN6P56747 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms