Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MIR218-2-201ENST00000385006 110 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 Y_RNA.626-201ENST00000411288 95 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.23□□□□□ -1.89
GFRA1P56159 RPL30P4-201ENST00000429309 333 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 RPS12P18-201ENST00000442381 270 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 Y_RNA.638-201ENST00000459374 113 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 AC146507.2-201ENST00000460608 476 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 AC083906.5-201ENST00000503722 328 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.23□□□□□ -1.89
GFRA1P56159 SNORA70.18-201ENST00000516696 98 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 RNU6-586P-201ENST00000517265 104 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 MIR4282-201ENST00000583613 67 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 DEFB117-201ENST00000602356 141 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 Z83818.1-201ENST00000603584 150 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
GFRA1P56159 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
GFRA1P56159 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.22□□□□□ -1.89
GFRA1P56159 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
GFRA1P56159 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
GFRA1P56159 AC058791.1-201ENST00000608412 3198 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 RNU6-454P-201ENST00000364292 107 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 Y_RNA.270-201ENST00000364693 104 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 RNU6-1274P-201ENST00000384557 107 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 MIR586-201ENST00000385035 97 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 U3.40-201ENST00000408706 208 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 AC093578.1-201ENST00000415219 368 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.22□□□□□ -1.89
GFRA1P56159 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.22□□□□□ -1.89
GFRA1P56159 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.22□□□□□ -1.89
GFRA1P56159 RNU7-170P-201ENST00000459303 61 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.22□□□□□ -1.89
GFRA1P56159 SNORD116-28-201ENST00000516123 91 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 RNU6-191P-201ENST00000516295 94 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 RNU6-1098P-201ENST00000516772 96 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 SCARNA3-201ENST00000517097 143 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 AC024405.2-202ENST00000532731 184 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 MIR3199-1-201ENST00000582434 88 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 MIR7851-201ENST00000610611 160 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 AC073349.3-201ENST00000617616 186 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 FTX_2.1-201ENST00000618816 94 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 AP003355.3-201ENST00000623465 114 ntBASIC3.22□□□□□ -1.89
GFRA1P56159 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.22□□□□□ -1.89
GFRA1P56159 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
GFRA1P56159 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
GFRA1P56159 Y_RNA.329-201ENST00000365209 107 ntBASIC3.21□□□□□ -1.9
GFRA1P56159 MIR7-3-201ENST00000384898 110 ntBASIC3.21□□□□□ -1.9
GFRA1P56159 MIR218-1-201ENST00000384999 110 ntBASIC3.21□□□□□ -1.9
GFRA1P56159 AL603908.1-201ENST00000406098 201 ntBASIC3.21□□□□□ -1.9
GFRA1P56159 U6atac.2-201ENST00000408644 118 ntBASIC3.21□□□□□ -1.9
GFRA1P56159 RNU6-651P-201ENST00000411040 105 ntBASIC3.21□□□□□ -1.9
GFRA1P56159 AC126124.2-201ENST00000413542 321 ntBASIC3.21□□□□□ -1.9
GFRA1P56159 DBIP2-201ENST00000419076 262 ntBASIC3.21□□□□□ -1.9
GFRA1P56159 RN7SL93P-201ENST00000463035 293 ntBASIC3.21□□□□□ -1.9
GFRA1P56159 RN7SL293P-201ENST00000481765 281 ntBASIC3.21□□□□□ -1.9
GFRA1P56159 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
GFRA1P56159 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.21□□□□□ -1.9
GFRA1P56159 RN7SKP83-201ENST00000516512 178 ntBASIC3.21□□□□□ -1.9
GFRA1P56159 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.21□□□□□ -1.9
GFRA1P56159 AC105245.1-201ENST00000581934 244 ntBASIC3.21□□□□□ -1.9
GFRA1P56159 AL713866.2-201ENST00000603579 219 ntBASIC3.21□□□□□ -1.9
GFRA1P56159 AC019176.2-201ENST00000611579 315 ntBASIC3.21□□□□□ -1.9
GFRA1P56159 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.21□□□□□ -1.9
GFRA1P56159 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
GFRA1P56159 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
GFRA1P56159 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.21□□□□□ -1.9
GFRA1P56159 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFRA1P56159 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
GFRA1P56159 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
GFRA1P56159 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFRA1P56159 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
GFRA1P56159 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFRA1P56159 Y_RNA.217-201ENST00000364214 105 ntBASIC3.2□□□□□ -1.9
GFRA1P56159 RNA5SP42-201ENST00000364278 115 ntBASIC3.2□□□□□ -1.9
GFRA1P56159 MIR183-201ENST00000384958 110 ntBASIC3.2□□□□□ -1.9
GFRA1P56159 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
GFRA1P56159 MIR300-201ENST00000401138 83 ntBASIC3.2□□□□□ -1.9
GFRA1P56159 U3.39-201ENST00000408569 239 ntBASIC3.2□□□□□ -1.9
GFRA1P56159 RNU6-1328P-201ENST00000410938 106 ntBASIC3.2□□□□□ -1.9
GFRA1P56159 AC074290.1-201ENST00000448883 135 ntBASIC3.2□□□□□ -1.9
GFRA1P56159 SNORD2.1-201ENST00000458762 69 ntBASIC3.2□□□□□ -1.9
GFRA1P56159 RNU7-14P-201ENST00000459331 62 ntBASIC3.2□□□□□ -1.9
GFRA1P56159 Y_RNA.641-201ENST00000459414 105 ntBASIC3.2□□□□□ -1.9
GFRA1P56159 AP002392.1-201ENST00000537692 208 ntBASIC3.2□□□□□ -1.9
GFRA1P56159 CBX3P4-201ENST00000538909 354 ntBASIC3.2□□□□□ -1.9
GFRA1P56159 AC005828.6-201ENST00000606610 232 ntBASIC3.2□□□□□ -1.9
GFRA1P56159 AC069294.1-201ENST00000608397 350 ntBASIC3.2□□□□□ -1.9
GFRA1P56159 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.2□□□□□ -1.9
GFRA1P56159 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFRA1P56159 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFRA1P56159 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.2□□□□□ -1.9
GFRA1P56159 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
GFRA1P56159 RNU1-72P-201ENST00000362976 153 ntBASIC3.19□□□□□ -1.9
GFRA1P56159 RNU1-18P-201ENST00000363062 164 ntBASIC3.19□□□□□ -1.9
GFRA1P56159 RNU6-944P-201ENST00000364023 107 ntBASIC3.19□□□□□ -1.9
GFRA1P56159 SNORA68.1-201ENST00000364537 132 ntBASIC3.19□□□□□ -1.9
GFRA1P56159 SNORA51.4-201ENST00000364993 124 ntBASIC3.19□□□□□ -1.9
GFRA1P56159 MIR548B-201ENST00000385247 97 ntBASIC3.19□□□□□ -1.9
GFRA1P56159 AL357075.1-201ENST00000404107 726 ntBASIC3.19□□□□□ -1.9
GFRA1P56159 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms