Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.92□□□□□ -2.1
HMGCS2P54868 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMGCS2P54868 RPL21P111-201ENST00000418453 477 ntBASIC1.92□□□□□ -2.1
HMGCS2P54868 PDCL2P1-201ENST00000419302 352 ntBASIC1.92□□□□□ -2.1
HMGCS2P54868 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.92□□□□□ -2.1
HMGCS2P54868 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGCS2P54868 MTND1P17-201ENST00000448961 204 ntBASIC1.92□□□□□ -2.1
HMGCS2P54868 PMCHL2-203ENST00000457791 237 ntBASIC1.92□□□□□ -2.1
HMGCS2P54868 RNU6-566P-201ENST00000516790 107 ntBASIC1.92□□□□□ -2.1
HMGCS2P54868 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGCS2P54868 AC093249.1-201ENST00000567049 203 ntBASIC1.92□□□□□ -2.1
HMGCS2P54868 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGCS2P54868 AL133215.3-201ENST00000609801 448 ntBASIC1.92□□□□□ -2.1
HMGCS2P54868 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.92□□□□□ -2.1
HMGCS2P54868 MIR8070-201ENST00000616510 88 ntBASIC1.92□□□□□ -2.1
HMGCS2P54868 AC022306.2-201ENST00000617563 647 ntBASIC1.92□□□□□ -2.1
HMGCS2P54868 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMGCS2P54868 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
HMGCS2P54868 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HMGCS2P54868 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
HMGCS2P54868 CBX3P1-201ENST00000325243 554 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.91□□□□□ -2.1
HMGCS2P54868 RNU6-845P-201ENST00000362578 103 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 Y_RNA.88-201ENST00000363029 99 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 RNY1P10-201ENST00000363268 113 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 RNU6-1210P-201ENST00000363775 107 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 RNU6-1032P-201ENST00000384100 107 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 RNU6-767P-201ENST00000384132 107 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 MIR17-201ENST00000385012 84 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 MIR95-201ENST00000385072 81 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 CBX3P9-201ENST00000402326 552 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 U3.40-201ENST00000408706 208 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 RN7SKP61-201ENST00000410642 295 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 RNU6-1245P-201ENST00000411130 106 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 AL133396.1-201ENST00000432048 687 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGCS2P54868 AC130509.1-201ENST00000464158 433 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.91□□□□□ -2.1
HMGCS2P54868 RPS27P21-201ENST00000486977 252 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 MTCO1P29-201ENST00000496868 288 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 HMGN1P12-201ENST00000499125 195 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 AC046134.1-201ENST00000514454 666 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 SNORA31.25-201ENST00000517242 134 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.91□□□□□ -2.1
HMGCS2P54868 AP005639.2-201ENST00000527592 928 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 AC087441.2-201ENST00000529141 262 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.91□□□□□ -2.1
HMGCS2P54868 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGCS2P54868 AC093913.1-201ENST00000614178 329 ntBASIC1.91□□□□□ -2.1
HMGCS2P54868 MTND4P1-201ENST00000457501 1466 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 RNU6-227P-201ENST00000362865 103 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 RNU1-42P-201ENST00000364033 160 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 U3.13-201ENST00000364804 214 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 Y_RNA.339-201ENST00000365325 102 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HMGCS2P54868 RNU6-1106P-201ENST00000390845 107 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 SNORA26.3-201ENST00000391119 136 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 AL356379.1-201ENST00000414105 126 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 EDDM3CP-201ENST00000415977 425 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 MTND3P9-201ENST00000429526 346 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 MTND4LP16-201ENST00000440828 295 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 AC107032.1-201ENST00000485945 480 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 SNORA31.16-201ENST00000516773 139 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 RNU7-30P-201ENST00000516835 62 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 SNORD53B-201ENST00000577887 78 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 MIR3618-201ENST00000580330 88 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.9□□□□□ -2.11
HMGCS2P54868 AL078605.1-201ENST00000603529 500 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 AL356157.2-201ENST00000605122 111 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 AC008121.3-201ENST00000618726 433 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 SDR42E1P4-201ENST00000620894 481 ntBASIC1.9□□□□□ -2.11
HMGCS2P54868 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.9□□□□□ -2.11
HMGCS2P54868 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HMGCS2P54868 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HMGCS2P54868 Y_RNA.184-201ENST00000363884 108 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 RNU6-1013P-201ENST00000384180 107 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 SNORA36A-201ENST00000384221 132 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 AC078809.1-201ENST00000427601 140 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGCS2P54868 AC244670.1-201ENST00000436879 112 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 AC092473.1-201ENST00000441098 221 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 AL161788.1-201ENST00000441805 169 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.89□□□□□ -2.11
HMGCS2P54868 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.89□□□□□ -2.11
HMGCS2P54868 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGCS2P54868 PPP1R2P5-201ENST00000457256 603 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 SNRPGP7-201ENST00000469016 106 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 AC055731.1-201ENST00000474387 401 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.89□□□□□ -2.11
HMGCS2P54868 HMGB1P35-201ENST00000503360 598 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 MTND5P5-201ENST00000503764 376 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 Y_RNA.682-201ENST00000516457 100 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 MIR514B-201ENST00000516774 80 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 RNU2-19P-201ENST00000517288 84 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 HSPE1P4-201ENST00000550617 308 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 IMMP1LP2-201ENST00000552954 492 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 MIR4287-201ENST00000579398 78 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 AP001094.1-201ENST00000579805 193 ntBASIC1.89□□□□□ -2.11
HMGCS2P54868 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
HMGCS2P54868 AC078795.3-201ENST00000602913 472 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms