Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 Y_RNA.405-201ENST00000383979 100 ntBASIC2.69□□□□□ -1.98
NEK3P51956 Y_RNA.451-201ENST00000384200 100 ntBASIC2.69□□□□□ -1.98
NEK3P51956 SNORD14D-201ENST00000384390 87 ntBASIC2.69□□□□□ -1.98
NEK3P51956 Y_RNA.524-201ENST00000384564 100 ntBASIC2.69□□□□□ -1.98
NEK3P51956 Y_RNA.561-201ENST00000384694 100 ntBASIC2.69□□□□□ -1.98
NEK3P51956 RNU6-541P-201ENST00000384709 110 ntBASIC2.69□□□□□ -1.98
NEK3P51956 MTCO2P27-201ENST00000420740 428 ntBASIC2.69□□□□□ -1.98
NEK3P51956 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.69□□□□□ -1.98
NEK3P51956 AC009237.7-201ENST00000447357 229 ntBASIC2.69□□□□□ -1.98
NEK3P51956 HMGN2P18-201ENST00000450680 270 ntBASIC2.69□□□□□ -1.98
NEK3P51956 RPL17P19-201ENST00000489069 552 ntBASIC2.69□□□□□ -1.98
NEK3P51956 MTND3P22-201ENST00000510932 243 ntBASIC2.69□□□□□ -1.98
NEK3P51956 MIR449C-201ENST00000516047 92 ntBASIC2.69□□□□□ -1.98
NEK3P51956 RNA5SP384-201ENST00000516615 116 ntBASIC2.69□□□□□ -1.98
NEK3P51956 RNU2-44P-201ENST00000516795 194 ntBASIC2.69□□□□□ -1.98
NEK3P51956 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.69□□□□□ -1.98
NEK3P51956 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.69□□□□□ -1.98
NEK3P51956 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.69□□□□□ -1.98
NEK3P51956 APOOP3-201ENST00000536787 586 ntBASIC2.69□□□□□ -1.98
NEK3P51956 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.69□□□□□ -1.98
NEK3P51956 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NEK3P51956 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NEK3P51956 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
NEK3P51956 RNU6-743P-201ENST00000364151 106 ntBASIC2.68□□□□□ -1.98
NEK3P51956 SNORA18.2-201ENST00000383865 132 ntBASIC2.68□□□□□ -1.98
NEK3P51956 Y_RNA.473-201ENST00000384333 102 ntBASIC2.68□□□□□ -1.98
NEK3P51956 RNU6-1026P-201ENST00000384465 108 ntBASIC2.68□□□□□ -1.98
NEK3P51956 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.68□□□□□ -1.98
NEK3P51956 RPL23AP50-201ENST00000434149 455 ntBASIC2.68□□□□□ -1.98
NEK3P51956 AC236972.2-201ENST00000434979 310 ntBASIC2.68□□□□□ -1.98
NEK3P51956 IFNA11P-201ENST00000446352 526 ntBASIC2.68□□□□□ -1.98
NEK3P51956 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.68□□□□□ -1.98
NEK3P51956 RNU7-14P-201ENST00000459331 62 ntBASIC2.68□□□□□ -1.98
NEK3P51956 RPL23AP94-201ENST00000512518 302 ntBASIC2.68□□□□□ -1.98
NEK3P51956 SCARNA16.2-201ENST00000516520 172 ntBASIC2.68□□□□□ -1.98
NEK3P51956 AC027288.2-201ENST00000553028 243 ntBASIC2.68□□□□□ -1.98
NEK3P51956 FRG2DP-202ENST00000566967 323 ntBASIC2.68□□□□□ -1.98
NEK3P51956 AL355375.2-201ENST00000574825 175 ntBASIC2.68□□□□□ -1.98
NEK3P51956 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.68□□□□□ -1.98
NEK3P51956 Y_RNA.804-201ENST00000615262 101 ntBASIC2.68□□□□□ -1.98
NEK3P51956 AL359314.1-201ENST00000616913 261 ntBASIC2.68□□□□□ -1.98
NEK3P51956 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.68□□□□□ -1.98
NEK3P51956 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.68□□□□□ -1.98
NEK3P51956 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.68□□□□□ -1.98
NEK3P51956 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.67□□□□□ -1.98
NEK3P51956 AC080100.1-201ENST00000624239 5356 ntBASIC2.67□□□□□ -1.98
NEK3P51956 Y_RNA.259-201ENST00000364619 101 ntBASIC2.67□□□□□ -1.98
NEK3P51956 Y_RNA.356-201ENST00000365475 113 ntBASIC2.67□□□□□ -1.98
NEK3P51956 RNU6-438P-201ENST00000365561 103 ntBASIC2.67□□□□□ -1.98
NEK3P51956 Y_RNA.529-201ENST00000384586 119 ntBASIC2.67□□□□□ -1.98
NEK3P51956 RNU6-310P-201ENST00000384655 107 ntBASIC2.67□□□□□ -1.98
NEK3P51956 HMGN2P39-201ENST00000398005 273 ntBASIC2.67□□□□□ -1.98
NEK3P51956 AC022028.1-201ENST00000412054 408 ntBASIC2.67□□□□□ -1.98
NEK3P51956 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.67□□□□□ -1.98
NEK3P51956 AC007098.1-201ENST00000420122 367 ntBASIC2.67□□□□□ -1.98
NEK3P51956 AC123900.1-201ENST00000420390 96 ntBASIC2.67□□□□□ -1.98
NEK3P51956 AC004386.2-201ENST00000441858 148 ntBASIC2.67□□□□□ -1.98
NEK3P51956 ELOCP24-201ENST00000456370 334 ntBASIC2.67□□□□□ -1.98
NEK3P51956 AC016925.1-201ENST00000458303 298 ntBASIC2.67□□□□□ -1.98
NEK3P51956 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.67□□□□□ -1.98
NEK3P51956 RNU6-344P-201ENST00000516635 111 ntBASIC2.67□□□□□ -1.98
NEK3P51956 RNU6-264P-201ENST00000517134 104 ntBASIC2.67□□□□□ -1.98
NEK3P51956 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.67□□□□□ -1.98
NEK3P51956 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.67□□□□□ -1.98
NEK3P51956 MIR5006-201ENST00000583027 110 ntBASIC2.67□□□□□ -1.98
NEK3P51956 MIR4635-201ENST00000583759 79 ntBASIC2.67□□□□□ -1.98
NEK3P51956 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
NEK3P51956 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.67□□□□□ -1.98
NEK3P51956 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NEK3P51956 Y_RNA.48-201ENST00000362710 103 ntBASIC2.66□□□□□ -1.98
NEK3P51956 RNU6-331P-201ENST00000384724 107 ntBASIC2.66□□□□□ -1.98
NEK3P51956 RNA5SP210-201ENST00000391034 120 ntBASIC2.66□□□□□ -1.98
NEK3P51956 RNU6-159P-201ENST00000391080 106 ntBASIC2.66□□□□□ -1.98
NEK3P51956 RNY4P36-201ENST00000391116 96 ntBASIC2.66□□□□□ -1.98
NEK3P51956 MIR190B-201ENST00000401119 79 ntBASIC2.66□□□□□ -1.98
NEK3P51956 SNORA11.2-201ENST00000408318 127 ntBASIC2.66□□□□□ -1.98
NEK3P51956 Y_RNA.646-201ENST00000410980 101 ntBASIC2.66□□□□□ -1.98
NEK3P51956 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.66□□□□□ -1.98
NEK3P51956 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.66□□□□□ -1.98
NEK3P51956 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.66□□□□□ -1.98
NEK3P51956 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.66□□□□□ -1.98
NEK3P51956 TOMM22P6-201ENST00000465035 409 ntBASIC2.66□□□□□ -1.98
NEK3P51956 RNU6-991P-201ENST00000516168 107 ntBASIC2.66□□□□□ -1.98
NEK3P51956 SNORA31.25-201ENST00000517242 134 ntBASIC2.66□□□□□ -1.98
NEK3P51956 AC087441.2-201ENST00000529141 262 ntBASIC2.66□□□□□ -1.98
NEK3P51956 ANP32BP3-201ENST00000559213 706 ntBASIC2.66□□□□□ -1.98
NEK3P51956 SUB1P3-201ENST00000564581 315 ntBASIC2.66□□□□□ -1.98
NEK3P51956 MIR4529-201ENST00000578110 78 ntBASIC2.66□□□□□ -1.98
NEK3P51956 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.66□□□□□ -1.98
NEK3P51956 ZNF204P-201ENST00000416749 2397 ntBASIC2.66□□□□□ -1.98
NEK3P51956 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NEK3P51956 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NEK3P51956 MIR449A-201ENST00000362113 91 ntBASIC2.65□□□□□ -1.99
NEK3P51956 RNU1-62P-201ENST00000362599 164 ntBASIC2.65□□□□□ -1.99
NEK3P51956 RNU1-139P-201ENST00000391307 165 ntBASIC2.65□□□□□ -1.99
NEK3P51956 MIR1262-201ENST00000408276 93 ntBASIC2.65□□□□□ -1.99
NEK3P51956 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.65□□□□□ -1.99
NEK3P51956 AC007395.1-201ENST00000451333 677 ntBASIC2.65□□□□□ -1.99
NEK3P51956 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.65□□□□□ -1.99
NEK3P51956 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms