Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.04□□□□□ -2.08
NEDD4P46934 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.04□□□□□ -2.08
NEDD4P46934 MIR3923-201ENST00000579521 83 ntBASIC2.04□□□□□ -2.08
NEDD4P46934 FGF7P1-201ENST00000582820 288 ntBASIC2.04□□□□□ -2.08
NEDD4P46934 AC124303.1-201ENST00000605703 360 ntBASIC2.04□□□□□ -2.08
NEDD4P46934 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.04□□□□□ -2.08
NEDD4P46934 AC090517.3-201ENST00000625170 141 ntBASIC2.04□□□□□ -2.08
NEDD4P46934 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.03□□□□□ -2.08
NEDD4P46934 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NEDD4P46934 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NEDD4P46934 snoU2_19.1-201ENST00000362361 80 ntBASIC2.03□□□□□ -2.08
NEDD4P46934 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NEDD4P46934 RNU6-784P-201ENST00000384330 106 ntBASIC2.03□□□□□ -2.08
NEDD4P46934 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NEDD4P46934 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.03□□□□□ -2.08
NEDD4P46934 NCOR1P3-201ENST00000420479 303 ntBASIC2.03□□□□□ -2.08
NEDD4P46934 CBX3P6-201ENST00000430257 527 ntBASIC2.03□□□□□ -2.08
NEDD4P46934 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.03□□□□□ -2.08
NEDD4P46934 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.03□□□□□ -2.08
NEDD4P46934 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.03□□□□□ -2.08
NEDD4P46934 AC091874.1-201ENST00000511402 339 ntBASIC2.03□□□□□ -2.08
NEDD4P46934 PTP4A1P4-201ENST00000512479 322 ntBASIC2.03□□□□□ -2.08
NEDD4P46934 AL117351.2-201ENST00000513571 157 ntBASIC2.03□□□□□ -2.08
NEDD4P46934 RNU6-273P-201ENST00000516937 96 ntBASIC2.03□□□□□ -2.08
NEDD4P46934 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.03□□□□□ -2.08
NEDD4P46934 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NEDD4P46934 POLR3GP2-201ENST00000588366 668 ntBASIC2.03□□□□□ -2.08
NEDD4P46934 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
NEDD4P46934 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.02□□□□□ -2.09
NEDD4P46934 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
NEDD4P46934 RNU6-596P-201ENST00000365395 98 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.02□□□□□ -2.09
NEDD4P46934 RNU6-1032P-201ENST00000384100 107 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 RNU6-1274P-201ENST00000384557 107 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 MIR524-201ENST00000385242 87 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
NEDD4P46934 RNU2-40P-201ENST00000410833 196 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 AC074085.1-201ENST00000413598 418 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.02□□□□□ -2.09
NEDD4P46934 ACA59.1-201ENST00000515966 143 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 RNU7-30P-201ENST00000516835 62 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 RNU1-54P-201ENST00000517181 120 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 CBX3P7-201ENST00000532876 502 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 AC018630.3-201ENST00000542637 96 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 AC005668.1-201ENST00000571142 476 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 AC104581.2-201ENST00000572227 430 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 MIR4790-201ENST00000577799 79 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.02□□□□□ -2.09
NEDD4P46934 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NEDD4P46934 AL161423.1-201ENST00000613700 262 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 SNORA43.4-201ENST00000629559 138 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 AL450472.1-202ENST00000637286 180 ntBASIC2.02□□□□□ -2.09
NEDD4P46934 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
NEDD4P46934 RNU4-15P-201ENST00000362613 141 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 Y_RNA.123-201ENST00000363338 102 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 RNU6-1286P-201ENST00000383871 107 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 MIR517A-201ENST00000385001 87 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 MTCYBP2-201ENST00000407745 171 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 MIR548K-201ENST00000408406 116 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 AC012306.1-201ENST00000423267 114 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.01□□□□□ -2.09
NEDD4P46934 AC098614.3-201ENST00000438957 440 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 AC009238.1-201ENST00000442165 424 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 AC009237.6-201ENST00000446969 424 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 MTND5P5-201ENST00000503764 376 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 Y_RNA.682-201ENST00000516457 100 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 RNU6-548P-201ENST00000517083 115 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.01□□□□□ -2.09
NEDD4P46934 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.01□□□□□ -2.09
NEDD4P46934 CYP4A27P-201ENST00000567218 190 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.01□□□□□ -2.09
NEDD4P46934 MIR3976-201ENST00000606807 139 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 uc_338.5-201ENST00000611839 155 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 AC005520.5-201ENST00000613926 164 ntBASIC2.01□□□□□ -2.09
NEDD4P46934 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
NEDD4P46934 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
NEDD4P46934 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.01□□□□□ -2.09
NEDD4P46934 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.01□□□□□ -2.09
NEDD4P46934 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NEDD4P46934 RNU6-593P-201ENST00000364716 112 ntBASIC2□□□□□ -2.09
NEDD4P46934 AL591034.2-201ENST00000402839 359 ntBASIC2□□□□□ -2.09
NEDD4P46934 RN7SKP158-201ENST00000410453 326 ntBASIC2□□□□□ -2.09
NEDD4P46934 EIF4EP2-201ENST00000422816 654 ntBASIC2□□□□□ -2.09
NEDD4P46934 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2□□□□□ -2.09
NEDD4P46934 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2□□□□□ -2.09
NEDD4P46934 AC145146.1-201ENST00000496370 254 ntBASIC2□□□□□ -2.09
NEDD4P46934 SNORA31.16-201ENST00000516773 139 ntBASIC2□□□□□ -2.09
NEDD4P46934 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2□□□□□ -2.09
NEDD4P46934 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2□□□□□ -2.09
NEDD4P46934 ANP32BP3-201ENST00000559213 706 ntBASIC2□□□□□ -2.09
NEDD4P46934 AL078605.1-201ENST00000603529 500 ntBASIC2□□□□□ -2.09
NEDD4P46934 Z98751.3-201ENST00000604447 521 ntBASIC2□□□□□ -2.09
NEDD4P46934 AC012493.3-201ENST00000604494 112 ntBASIC2□□□□□ -2.09
NEDD4P46934 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2□□□□□ -2.09
NEDD4P46934 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NEDD4P46934 Y_RNA.88-201ENST00000363029 99 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 RNU5B-2P-201ENST00000363036 113 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 Y_RNA.339-201ENST00000365325 102 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 SNORA25B-201ENST00000365507 128 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 Y_RNA.390-201ENST00000383932 102 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms