Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.46□□□□□ -2.48
HTTP42858 AC023158.1-201ENST00000561632 1025 ntBASIC-0.46□□□□□ -2.48
HTTP42858 AL391840.1-201ENST00000571144 367 ntBASIC-0.46□□□□□ -2.48
HTTP42858 AC007014.2-201ENST00000615581 479 ntBASIC-0.46□□□□□ -2.48
HTTP42858 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.46□□□□□ -2.48
HTTP42858 Y_RNA.62-201ENST00000362840 99 ntBASIC-0.46□□□□□ -2.48
HTTP42858 RNU6-778P-201ENST00000363269 103 ntBASIC-0.46□□□□□ -2.48
HTTP42858 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.46□□□□□ -2.48
HTTP42858 RNU6-438P-201ENST00000365561 103 ntBASIC-0.46□□□□□ -2.48
HTTP42858 RNU6-127P-201ENST00000390897 107 ntBASIC-0.46□□□□□ -2.48
HTTP42858 AL109755.1-201ENST00000401791 649 ntBASIC-0.46□□□□□ -2.48
HTTP42858 USP9YP14-201ENST00000430663 563 ntBASIC-0.46□□□□□ -2.48
HTTP42858 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.46□□□□□ -2.48
HTTP42858 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.46□□□□□ -2.48
HTTP42858 RNU7-34P-201ENST00000459394 64 ntBASIC-0.46□□□□□ -2.48
HTTP42858 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-0.46□□□□□ -2.48
HTTP42858 MTCYBP43-201ENST00000513621 740 ntBASIC-0.46□□□□□ -2.48
HTTP42858 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.46□□□□□ -2.48
HTTP42858 AP000763.2-201ENST00000540641 163 ntBASIC-0.46□□□□□ -2.48
HTTP42858 AC122134.1-202ENST00000569111 1201 ntBASIC-0.46□□□□□ -2.48
HTTP42858 MIR4300-201ENST00000581016 96 ntBASIC-0.46□□□□□ -2.48
HTTP42858 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.46□□□□□ -2.48
HTTP42858 AC093875.1-201ENST00000623688 504 ntBASIC-0.46□□□□□ -2.48
HTTP42858 AL356596.1-201ENST00000624230 379 ntBASIC-0.46□□□□□ -2.48
HTTP42858 RNU6-441P-201ENST00000384545 106 ntBASIC-0.47□□□□□ -2.48
HTTP42858 RPP40P1-201ENST00000426762 456 ntBASIC-0.47□□□□□ -2.48
HTTP42858 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.47□□□□□ -2.48
HTTP42858 AC016925.1-201ENST00000458303 298 ntBASIC-0.47□□□□□ -2.48
HTTP42858 RNU7-94P-201ENST00000459576 63 ntBASIC-0.47□□□□□ -2.48
HTTP42858 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.47□□□□□ -2.48
HTTP42858 MIR3115-201ENST00000577915 68 ntBASIC-0.47□□□□□ -2.48
HTTP42858 AC246785.4-201ENST00000605374 287 ntBASIC-0.47□□□□□ -2.48
HTTP42858 MIR6514-201ENST00000622549 70 ntBASIC-0.47□□□□□ -2.48
HTTP42858 MTND1P37-201ENST00000636562 264 ntBASIC-0.47□□□□□ -2.48
HTTP42858 AL357139.1-201ENST00000407792 426 ntBASIC-0.47□□□□□ -2.48
HTTP42858 RPS15AP10-201ENST00000432472 382 ntBASIC-0.47□□□□□ -2.48
HTTP42858 MTCO1P5-201ENST00000433573 344 ntBASIC-0.47□□□□□ -2.48
HTTP42858 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.47□□□□□ -2.48
HTTP42858 AC008993.2-201ENST00000631744 806 ntBASIC-0.47□□□□□ -2.48
HTTP42858 SEC63P2-201ENST00000503863 1939 ntBASIC-0.47□□□□□ -2.48
HTTP42858 ENSAP3-201ENST00000312710 333 ntBASIC-0.47□□□□□ -2.49
HTTP42858 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.47□□□□□ -2.49
HTTP42858 RNU6-40P-201ENST00000384254 107 ntBASIC-0.47□□□□□ -2.49
HTTP42858 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.47□□□□□ -2.49
HTTP42858 AL133475.1-201ENST00000404414 305 ntBASIC-0.47□□□□□ -2.49
HTTP42858 AL136310.1-201ENST00000404926 654 ntBASIC-0.47□□□□□ -2.49
HTTP42858 ZNF885P-201ENST00000420174 1098 ntBASIC-0.47□□□□□ -2.49
HTTP42858 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.47□□□□□ -2.49
HTTP42858 USP9YP25-201ENST00000457708 443 ntBASIC-0.47□□□□□ -2.49
HTTP42858 HMGB1P51-201ENST00000605166 638 ntBASIC-0.47□□□□□ -2.49
HTTP42858 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.47□□□□□ -2.49
HTTP42858 AC006504.8-201ENST00000621046 635 ntBASIC-0.47□□□□□ -2.49
HTTP42858 AC106754.2-201ENST00000623006 233 ntBASIC-0.47□□□□□ -2.49
HTTP42858 MIR3529-201ENST00000637713 78 ntBASIC-0.47□□□□□ -2.49
HTTP42858 SNORA72.2-201ENST00000365028 127 ntBASIC-0.48□□□□□ -2.49
HTTP42858 MTCO2P31-201ENST00000402702 684 ntBASIC-0.48□□□□□ -2.49
HTTP42858 MTCO3P43-201ENST00000440974 771 ntBASIC-0.48□□□□□ -2.49
HTTP42858 HMGN3P1-201ENST00000453847 193 ntBASIC-0.48□□□□□ -2.49
HTTP42858 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.48□□□□□ -2.49
HTTP42858 HIGD1AP6-201ENST00000521833 279 ntBASIC-0.48□□□□□ -2.49
HTTP42858 AL451064.1-201ENST00000607718 471 ntBASIC-0.48□□□□□ -2.49
HTTP42858 MIR29B2-201ENST00000385055 81 ntBASIC-0.48□□□□□ -2.49
HTTP42858 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.48□□□□□ -2.49
HTTP42858 AC107297.1-201ENST00000459991 176 ntBASIC-0.48□□□□□ -2.49
HTTP42858 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.48□□□□□ -2.49
HTTP42858 RNU6-202P-201ENST00000515998 96 ntBASIC-0.48□□□□□ -2.49
HTTP42858 RNA5SP94-201ENST00000516917 108 ntBASIC-0.48□□□□□ -2.49
HTTP42858 SNORD39.3-201ENST00000584451 71 ntBASIC-0.48□□□□□ -2.49
HTTP42858 SCARNA4-202ENST00000625402 129 ntBASIC-0.48□□□□□ -2.49
HTTP42858 RNU6-862P-201ENST00000362804 105 ntBASIC-0.49□□□□□ -2.49
HTTP42858 RNY4P16-201ENST00000364768 94 ntBASIC-0.49□□□□□ -2.49
HTTP42858 SNORD31B-201ENST00000364977 69 ntBASIC-0.49□□□□□ -2.49
HTTP42858 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.49□□□□□ -2.49
HTTP42858 AC027644.1-201ENST00000419595 298 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AC002486.1-201ENST00000435098 391 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AC012308.1-201ENST00000451232 178 ntBASIC-0.49□□□□□ -2.49
HTTP42858 CECR9-201ENST00000453421 199 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.49□□□□□ -2.49
HTTP42858 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.49□□□□□ -2.49
HTTP42858 RNU6-840P-201ENST00000517275 65 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
HTTP42858 AP003716.2-201ENST00000528260 108 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AP002001.1-203ENST00000534002 267 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AC093012.1-202ENST00000549403 582 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AL671309.1-201ENST00000603750 544 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AL513423.1-201ENST00000621695 132 ntBASIC-0.49□□□□□ -2.49
HTTP42858 SNORD114-19-201ENST00000363072 75 ntBASIC-0.49□□□□□ -2.49
HTTP42858 RNU6-743P-201ENST00000364151 106 ntBASIC-0.49□□□□□ -2.49
HTTP42858 RNU6-921P-201ENST00000384361 107 ntBASIC-0.49□□□□□ -2.49
HTTP42858 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.49□□□□□ -2.49
HTTP42858 RAP1BP3-201ENST00000407180 549 ntBASIC-0.49□□□□□ -2.49
HTTP42858 ELOCP14-201ENST00000428070 331 ntBASIC-0.49□□□□□ -2.49
HTTP42858 GPM6BP2-201ENST00000432046 144 ntBASIC-0.49□□□□□ -2.49
HTTP42858 ELOCP7-201ENST00000439968 331 ntBASIC-0.49□□□□□ -2.49
HTTP42858 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.49□□□□□ -2.49
HTTP42858 GPM6BP1-201ENST00000446387 144 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AL606517.1-201ENST00000446914 387 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AC109445.1-201ENST00000512356 383 ntBASIC-0.49□□□□□ -2.49
HTTP42858 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms