Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 RN7SKP299-201ENST00000606679 301 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 AC005520.5-201ENST00000613926 164 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 AC083806.3-201ENST00000614016 455 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 AC139792.3-201ENST00000623525 224 ntBASIC1.38□□□□□ -2.19
FDFT1P37268 AL159152.1-201ENST00000635019 2587 ntBASIC1.37□□□□□ -2.19
FDFT1P37268 RNU6-227P-201ENST00000362865 103 ntBASIC1.37□□□□□ -2.19
FDFT1P37268 RNU1-76P-201ENST00000362903 159 ntBASIC1.37□□□□□ -2.19
FDFT1P37268 RNU4-66P-201ENST00000365199 138 ntBASIC1.37□□□□□ -2.19
FDFT1P37268 MTND3P9-201ENST00000429526 346 ntBASIC1.37□□□□□ -2.19
FDFT1P37268 snoU13.6-201ENST00000458785 104 ntBASIC1.37□□□□□ -2.19
FDFT1P37268 HMGN1P13-201ENST00000505795 138 ntBASIC1.37□□□□□ -2.19
FDFT1P37268 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.37□□□□□ -2.19
FDFT1P37268 AC091133.4-201ENST00000511142 308 ntBASIC1.37□□□□□ -2.19
FDFT1P37268 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.37□□□□□ -2.19
FDFT1P37268 AC104576.1-201ENST00000524225 88 ntBASIC1.37□□□□□ -2.19
FDFT1P37268 CENPUP1-201ENST00000526649 1202 ntBASIC1.37□□□□□ -2.19
FDFT1P37268 AC025423.5-201ENST00000550230 219 ntBASIC1.37□□□□□ -2.19
FDFT1P37268 AL357078.3-201ENST00000607528 618 ntBASIC1.37□□□□□ -2.19
FDFT1P37268 AC064836.2-201ENST00000609491 462 ntBASIC1.37□□□□□ -2.19
FDFT1P37268 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.37□□□□□ -2.19
FDFT1P37268 AC009509.4-201ENST00000619202 509 ntBASIC1.37□□□□□ -2.19
FDFT1P37268 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.37□□□□□ -2.19
FDFT1P37268 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
FDFT1P37268 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
FDFT1P37268 Y_RNA.132-201ENST00000363421 102 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 RNU6-82P-201ENST00000363970 107 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 RNA5SP99-201ENST00000364020 114 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 SNORA18.2-201ENST00000383865 132 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 RNY3P9-201ENST00000384727 106 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 DEFB108C-201ENST00000400154 252 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 AL663109.1-201ENST00000411498 844 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.36□□□□□ -2.19
FDFT1P37268 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.36□□□□□ -2.19
FDFT1P37268 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.36□□□□□ -2.19
FDFT1P37268 USP9YP28-201ENST00000435142 589 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 AC007395.1-201ENST00000451333 677 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.36□□□□□ -2.19
FDFT1P37268 AC016925.1-201ENST00000458303 298 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 RPL9P9-202ENST00000466501 579 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.36□□□□□ -2.19
FDFT1P37268 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.36□□□□□ -2.19
FDFT1P37268 AC025465.4-201ENST00000513422 638 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 RNU6-902P-201ENST00000517212 91 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.36□□□□□ -2.19
FDFT1P37268 HMGB1P33-201ENST00000563485 527 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 SNORA77B-201ENST00000578179 125 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 ZNF209P-201ENST00000593450 2304 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
FDFT1P37268 AC103705.1-201ENST00000619013 241 ntBASIC1.36□□□□□ -2.19
FDFT1P37268 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
FDFT1P37268 AL161722.3-201ENST00000605789 2983 ntBASIC1.35□□□□□ -2.19
FDFT1P37268 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
FDFT1P37268 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
FDFT1P37268 Y_RNA.378-201ENST00000365652 113 ntBASIC1.35□□□□□ -2.19
FDFT1P37268 Y_RNA.409-201ENST00000383990 98 ntBASIC1.35□□□□□ -2.19
FDFT1P37268 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.35□□□□□ -2.19
FDFT1P37268 FTH1P12-201ENST00000432137 551 ntBASIC1.35□□□□□ -2.19
FDFT1P37268 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.35□□□□□ -2.19
FDFT1P37268 JTBP1-201ENST00000441314 247 ntBASIC1.35□□□□□ -2.19
FDFT1P37268 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.35□□□□□ -2.19
FDFT1P37268 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.35□□□□□ -2.19
FDFT1P37268 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.35□□□□□ -2.19
FDFT1P37268 TPT1P7-201ENST00000458300 517 ntBASIC1.35□□□□□ -2.19
FDFT1P37268 U8.21-201ENST00000459536 136 ntBASIC1.35□□□□□ -2.19
FDFT1P37268 AC010531.2-201ENST00000465012 153 ntBASIC1.35□□□□□ -2.19
FDFT1P37268 RPL26P26-201ENST00000480251 434 ntBASIC1.35□□□□□ -2.19
FDFT1P37268 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.35□□□□□ -2.19
FDFT1P37268 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.35□□□□□ -2.19
FDFT1P37268 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.35□□□□□ -2.19
FDFT1P37268 AL118558.2-201ENST00000556294 238 ntBASIC1.35□□□□□ -2.19
FDFT1P37268 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.35□□□□□ -2.19
FDFT1P37268 SNORA59B-202ENST00000578183 701 ntBASIC1.35□□□□□ -2.19
FDFT1P37268 MIR4303-201ENST00000581299 66 ntBASIC1.35□□□□□ -2.19
FDFT1P37268 MIR3611-201ENST00000584484 83 ntBASIC1.35□□□□□ -2.19
FDFT1P37268 AC017083.3-201ENST00000609955 700 ntBASIC1.35□□□□□ -2.19
FDFT1P37268 AL121757.2-201ENST00000611223 313 ntBASIC1.35□□□□□ -2.19
FDFT1P37268 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
FDFT1P37268 RNU6-545P-201ENST00000362681 104 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 RNU6-1317P-201ENST00000364582 104 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 RNU6-877P-201ENST00000383868 107 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 SNORA69-201ENST00000383895 132 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 RNU6-38P-201ENST00000384085 107 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 SNORD26-201ENST00000384147 75 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 EBAG9P1-201ENST00000418955 543 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 C8orf59P1-201ENST00000429930 303 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 ATP5J2P3-201ENST00000451550 258 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 RPS29P27-201ENST00000463711 170 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 AC099513.1-201ENST00000490423 301 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 MTCYBP18-201ENST00000501056 747 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 AC091435.1-201ENST00000505442 584 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 Y_RNA.688-201ENST00000516565 95 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 RNU6-1069P-201ENST00000516612 133 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.34□□□□□ -2.19
FDFT1P37268 AP003033.1-201ENST00000527244 415 ntBASIC1.34□□□□□ -2.19
FDFT1P37268 AC104383.1-201ENST00000530297 370 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms