Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.55□□□□□ -2.16
HOXA9P31269 AL137159.1-201ENST00000452808 512 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.55□□□□□ -2.16
HOXA9P31269 HMGN2P26-201ENST00000463169 339 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.55□□□□□ -2.16
HOXA9P31269 AC096745.1-201ENST00000509945 370 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 Y_RNA.665-201ENST00000516177 98 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 SNORA31.16-201ENST00000516773 139 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 AC087854.1-201ENST00000519706 414 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 AC104576.1-201ENST00000524225 88 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.55□□□□□ -2.16
HOXA9P31269 AP001836.1-201ENST00000604675 523 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 ELOCP5-201ENST00000604924 333 ntBASIC1.55□□□□□ -2.16
HOXA9P31269 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HOXA9P31269 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HOXA9P31269 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HOXA9P31269 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.54□□□□□ -2.16
HOXA9P31269 RNU6-254P-201ENST00000363377 107 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 Y_RNA.373-201ENST00000365600 103 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 Y_RNA.450-201ENST00000384198 113 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 EIF4E2P1-201ENST00000393781 255 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 ARL5AP1-201ENST00000418991 388 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 USP9YP18-201ENST00000425912 695 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 AL354695.1-201ENST00000427935 228 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 AC244670.1-201ENST00000436879 112 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 RPS29P27-201ENST00000463711 170 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 SNORA19.2-201ENST00000516013 114 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 RN7SKP256-201ENST00000517201 314 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 AC109635.3-201ENST00000529536 185 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 SNRPGP17-201ENST00000603780 214 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 AC018889.1-201ENST00000605372 397 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HOXA9P31269 AC090517.2-201ENST00000614966 680 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 AL132822.1-201ENST00000617063 513 ntBASIC1.54□□□□□ -2.16
HOXA9P31269 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HOXA9P31269 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
HOXA9P31269 Y_RNA.9-201ENST00000362354 101 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.53□□□□□ -2.16
HOXA9P31269 Y_RNA.597-201ENST00000410463 100 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 RN7SKP61-201ENST00000410642 295 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 RNU2-32P-201ENST00000411193 191 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.53□□□□□ -2.16
HOXA9P31269 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.53□□□□□ -2.16
HOXA9P31269 AL133396.1-201ENST00000432048 687 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.53□□□□□ -2.16
HOXA9P31269 AL359672.1-201ENST00000442302 409 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.53□□□□□ -2.16
HOXA9P31269 RNU7-66P-201ENST00000459469 62 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 TOMM22P6-201ENST00000465035 409 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 RPS29P25-201ENST00000481709 171 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 AC022447.4-201ENST00000504053 364 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.53□□□□□ -2.16
HOXA9P31269 FAM206BP-201ENST00000510179 541 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 RNU6-1332P-201ENST00000516666 104 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 RNU6-965P-201ENST00000516721 96 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 AC115990.1-201ENST00000526957 301 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 NDUFA5P6-201ENST00000542110 379 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 HSPE1P4-201ENST00000550617 308 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 TRAV32-201ENST00000553993 340 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 ZNF519P2-201ENST00000557032 169 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.53□□□□□ -2.16
HOXA9P31269 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.53□□□□□ -2.16
HOXA9P31269 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.53□□□□□ -2.16
HOXA9P31269 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 AP000648.3-201ENST00000623539 4507 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 SNORA43.4-201ENST00000629559 138 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 SNORD98-201ENST00000636377 67 ntBASIC1.53□□□□□ -2.16
HOXA9P31269 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.53□□□□□ -2.16
HOXA9P31269 U8.1-201ENST00000362843 134 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 Y_RNA.89-201ENST00000363031 102 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 RNU4-12P-201ENST00000365233 139 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 RNU6-546P-201ENST00000383991 107 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 RNU6-142P-201ENST00000384019 107 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 SNORA36A-201ENST00000384221 132 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
HOXA9P31269 SNORD115-47-201ENST00000391226 86 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 MIR450B-201ENST00000401182 78 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 AL590135.1-201ENST00000422215 156 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 EIF4EP2-201ENST00000422816 654 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 AC019205.3-201ENST00000424573 156 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.52□□□□□ -2.17
HOXA9P31269 AC078809.1-201ENST00000427601 140 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.52□□□□□ -2.17
HOXA9P31269 AC016700.2-201ENST00000446011 156 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 RNU6-1037P-201ENST00000459571 107 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 AC132942.1-201ENST00000486753 483 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.52□□□□□ -2.17
HOXA9P31269 AC015911.1-201ENST00000495111 156 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 AC008628.2-201ENST00000502605 298 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 AC011352.1-201ENST00000512300 793 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 RNU6-667P-201ENST00000517186 102 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 AP000763.2-201ENST00000540641 163 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 AC018630.3-201ENST00000542637 96 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.52□□□□□ -2.17
HOXA9P31269 AC078795.3-201ENST00000602913 472 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 AL034555.1-201ENST00000604816 211 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 AL356157.2-201ENST00000605122 111 ntBASIC1.52□□□□□ -2.17
HOXA9P31269 U4.5-201ENST00000617137 123 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms