Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 AC068137.3-201ENST00000639191 341 ntBASIC1.68□□□□□ -2.14
PTPN6P29350 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PTPN6P29350 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
PTPN6P29350 AC121333.1-201ENST00000567488 2709 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 Y_RNA.123-201ENST00000363338 102 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 RNU4-24P-201ENST00000364565 139 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 SNORD31B-201ENST00000364977 69 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 Y_RNA.372-201ENST00000365599 102 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 RNU6-933P-201ENST00000384424 107 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 MIR30A-201ENST00000385092 71 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 MIR450B-201ENST00000401182 78 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 AC139712.2-201ENST00000424302 339 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 RNU1-131P-201ENST00000458943 161 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 TOMM22P6-201ENST00000465035 409 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.67□□□□□ -2.14
PTPN6P29350 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 AC010900.2-201ENST00000604508 210 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 AC092954.2-201ENST00000609103 430 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.67□□□□□ -2.14
PTPN6P29350 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
PTPN6P29350 WWP1P1-201ENST00000466609 2769 ntBASIC1.66□□□□□ -2.14
PTPN6P29350 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
PTPN6P29350 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
PTPN6P29350 Y_RNA.167-201ENST00000363735 109 ntBASIC1.66□□□□□ -2.14
PTPN6P29350 Y_RNA.373-201ENST00000365600 103 ntBASIC1.66□□□□□ -2.14
PTPN6P29350 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.66□□□□□ -2.14
PTPN6P29350 SNORA29-201ENST00000384183 140 ntBASIC1.66□□□□□ -2.14
PTPN6P29350 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
PTPN6P29350 RNU6-325P-201ENST00000411132 105 ntBASIC1.66□□□□□ -2.14
PTPN6P29350 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.66□□□□□ -2.14
PTPN6P29350 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.66□□□□□ -2.14
PTPN6P29350 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.66□□□□□ -2.14
PTPN6P29350 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PTPN6P29350 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.66□□□□□ -2.14
PTPN6P29350 AC130509.1-201ENST00000464158 433 ntBASIC1.66□□□□□ -2.14
PTPN6P29350 RNVU1-2-201ENST00000516326 135 ntBASIC1.66□□□□□ -2.14
PTPN6P29350 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.66□□□□□ -2.14
PTPN6P29350 AC100830.2-201ENST00000581636 240 ntBASIC1.66□□□□□ -2.14
PTPN6P29350 AC005786.1-201ENST00000588553 154 ntBASIC1.66□□□□□ -2.14
PTPN6P29350 AC010525.2-201ENST00000590920 195 ntBASIC1.66□□□□□ -2.14
PTPN6P29350 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PTPN6P29350 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
PTPN6P29350 RNU1-76P-201ENST00000362903 159 ntBASIC1.65□□□□□ -2.15
PTPN6P29350 RNU6-522P-201ENST00000364497 107 ntBASIC1.65□□□□□ -2.15
PTPN6P29350 MIR521-1-201ENST00000384902 87 ntBASIC1.65□□□□□ -2.15
PTPN6P29350 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
PTPN6P29350 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
PTPN6P29350 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
PTPN6P29350 RNA5SP494-201ENST00000410653 129 ntBASIC1.65□□□□□ -2.15
PTPN6P29350 NCOR1P3-201ENST00000420479 303 ntBASIC1.65□□□□□ -2.15
PTPN6P29350 HSPE1P21-201ENST00000438283 308 ntBASIC1.65□□□□□ -2.15
PTPN6P29350 MTCO1P29-201ENST00000496868 288 ntBASIC1.65□□□□□ -2.15
PTPN6P29350 RPL23AP63-201ENST00000498752 471 ntBASIC1.65□□□□□ -2.15
PTPN6P29350 FAM206BP-201ENST00000510179 541 ntBASIC1.65□□□□□ -2.15
PTPN6P29350 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.65□□□□□ -2.15
PTPN6P29350 RNU6-506P-201ENST00000516553 94 ntBASIC1.65□□□□□ -2.15
PTPN6P29350 RNU6-314P-201ENST00000516574 104 ntBASIC1.65□□□□□ -2.15
PTPN6P29350 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.65□□□□□ -2.15
PTPN6P29350 AC026371.1-201ENST00000551867 419 ntBASIC1.65□□□□□ -2.15
PTPN6P29350 AC104581.2-201ENST00000572227 430 ntBASIC1.65□□□□□ -2.15
PTPN6P29350 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.65□□□□□ -2.15
PTPN6P29350 AC080013.6-201ENST00000606185 215 ntBASIC1.65□□□□□ -2.15
PTPN6P29350 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.65□□□□□ -2.15
PTPN6P29350 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.65□□□□□ -2.15
PTPN6P29350 RNU6-661P-201ENST00000362409 107 ntBASIC1.64□□□□□ -2.15
PTPN6P29350 RNU4-75P-201ENST00000364621 146 ntBASIC1.64□□□□□ -2.15
PTPN6P29350 SNORA18.2-201ENST00000383865 132 ntBASIC1.64□□□□□ -2.15
PTPN6P29350 RNU6-968P-201ENST00000384076 107 ntBASIC1.64□□□□□ -2.15
PTPN6P29350 SNORA12.2-201ENST00000391040 156 ntBASIC1.64□□□□□ -2.15
PTPN6P29350 AL590002.1-201ENST00000406554 418 ntBASIC1.64□□□□□ -2.15
PTPN6P29350 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.64□□□□□ -2.15
PTPN6P29350 CYCSP49-201ENST00000420810 319 ntBASIC1.64□□□□□ -2.15
PTPN6P29350 DLGAP5P1-201ENST00000430307 464 ntBASIC1.64□□□□□ -2.15
PTPN6P29350 HMGB1P18-201ENST00000438801 619 ntBASIC1.64□□□□□ -2.15
PTPN6P29350 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.64□□□□□ -2.15
PTPN6P29350 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.64□□□□□ -2.15
PTPN6P29350 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
PTPN6P29350 MIR3618-201ENST00000580330 88 ntBASIC1.64□□□□□ -2.15
PTPN6P29350 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
PTPN6P29350 FAM157A-202ENST00000615155 405 ntBASIC1.64□□□□□ -2.15
PTPN6P29350 AC099654.12-201ENST00000639868 649 ntBASIC1.64□□□□□ -2.15
PTPN6P29350 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.63□□□□□ -2.15
PTPN6P29350 Y_RNA.132-201ENST00000363421 102 ntBASIC1.63□□□□□ -2.15
PTPN6P29350 RNU4-42P-201ENST00000364738 142 ntBASIC1.63□□□□□ -2.15
PTPN6P29350 RNU6-1286P-201ENST00000383871 107 ntBASIC1.63□□□□□ -2.15
PTPN6P29350 Y_RNA.436-201ENST00000384097 102 ntBASIC1.63□□□□□ -2.15
PTPN6P29350 RNA5SP100-201ENST00000410903 110 ntBASIC1.63□□□□□ -2.15
PTPN6P29350 RNA5SP59-201ENST00000410922 110 ntBASIC1.63□□□□□ -2.15
PTPN6P29350 AC016907.1-201ENST00000419483 435 ntBASIC1.63□□□□□ -2.15
PTPN6P29350 AL645568.3-201ENST00000433683 316 ntBASIC1.63□□□□□ -2.15
PTPN6P29350 USP9YP28-201ENST00000435142 589 ntBASIC1.63□□□□□ -2.15
PTPN6P29350 NDUFA5P4-201ENST00000436704 385 ntBASIC1.63□□□□□ -2.15
PTPN6P29350 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.63□□□□□ -2.15
PTPN6P29350 AC007395.1-201ENST00000451333 677 ntBASIC1.63□□□□□ -2.15
PTPN6P29350 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.63□□□□□ -2.15
PTPN6P29350 AC016925.1-201ENST00000458303 298 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms