Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RN7SKP192-201ENST00000411291 327 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 RPL37P10-201ENST00000412884 288 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 AC243428.1-201ENST00000421099 264 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 AL358453.1-201ENST00000422522 250 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PTPN3P26045 MTND4P18-201ENST00000447010 465 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 FTH1P25-201ENST00000447665 469 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 RPL23AP7-203ENST00000449021 469 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 AL021397.1-201ENST00000451806 248 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.12□□□□□ -2.07
PTPN3P26045 PRELID3BP1-201ENST00000457142 540 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 AF186996.7-201ENST00000492781 209 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 AC008549.1-201ENST00000512900 643 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 AC026782.1-201ENST00000512952 449 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 MRPS36P4-201ENST00000534436 298 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.12□□□□□ -2.07
PTPN3P26045 AL121579.1-201ENST00000555129 305 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 AC109446.1-201ENST00000566172 220 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 MIR548S-201ENST00000581352 82 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.12□□□□□ -2.07
PTPN3P26045 AC099654.5-201ENST00000636479 350 ntBASIC2.12□□□□□ -2.07
PTPN3P26045 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.12□□□□□ -2.07
PTPN3P26045 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
PTPN3P26045 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PTPN3P26045 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PTPN3P26045 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PTPN3P26045 ZNF658B-202ENST00000615961 3375 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
PTPN3P26045 RNA5SP160-201ENST00000364866 120 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 RNU4-9P-201ENST00000364951 139 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 RNU6-378P-201ENST00000384324 107 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 Y_RNA.490-201ENST00000384413 102 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 SNORA64-201ENST00000384674 134 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 MIR208B-201ENST00000401172 77 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 AL512604.1-201ENST00000404812 257 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 AL356432.1-201ENST00000405809 419 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 RNA5SP494-201ENST00000410653 129 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 RN7SKP284-201ENST00000411002 343 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 AL139156.1-201ENST00000412785 841 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 DPH3P2-201ENST00000422618 250 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 USP9YP30-201ENST00000430729 455 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 OR2AQ1P-201ENST00000451972 200 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.11□□□□□ -2.07
PTPN3P26045 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.11□□□□□ -2.07
PTPN3P26045 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.11□□□□□ -2.07
PTPN3P26045 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.11□□□□□ -2.07
PTPN3P26045 AC011494.1-201ENST00000596454 237 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 AP000654.2-201ENST00000605633 586 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 SDR42E1P4-201ENST00000620894 481 ntBASIC2.11□□□□□ -2.07
PTPN3P26045 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
PTPN3P26045 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.11□□□□□ -2.07
PTPN3P26045 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PTPN3P26045 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PTPN3P26045 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
PTPN3P26045 RNU6-842P-201ENST00000384269 107 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 SNORA67.3-201ENST00000384366 140 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 SNORD14D-201ENST00000384390 87 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 RNU6-601P-201ENST00000384540 107 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 RN7SKP223-201ENST00000410582 62 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 Z82205.1-201ENST00000428456 297 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 RNU6-717P-201ENST00000459076 104 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 AC007215.1-201ENST00000464893 276 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 RPL23AP75-201ENST00000491601 451 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 MIR449C-201ENST00000516047 92 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 IGKV3-31-201ENST00000523109 329 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.1□□□□□ -2.07
PTPN3P26045 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.1□□□□□ -2.07
PTPN3P26045 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.1□□□□□ -2.07
PTPN3P26045 MIR4287-201ENST00000579398 78 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 AC005730.3-201ENST00000583067 366 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.1□□□□□ -2.07
PTPN3P26045 AC025253.1-201ENST00000613623 543 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.1□□□□□ -2.07
PTPN3P26045 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.1□□□□□ -2.07
PTPN3P26045 MIR1248-201ENST00000629190 106 ntBASIC2.1□□□□□ -2.07
PTPN3P26045 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PTPN3P26045 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
PTPN3P26045 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PTPN3P26045 SNORD115-8-201ENST00000363856 82 ntBASIC2.09□□□□□ -2.07
PTPN3P26045 SNORD115-38-201ENST00000365037 82 ntBASIC2.09□□□□□ -2.07
PTPN3P26045 RNA5SP37-201ENST00000365420 130 ntBASIC2.09□□□□□ -2.07
PTPN3P26045 RNU6-26P-201ENST00000383985 107 ntBASIC2.09□□□□□ -2.07
PTPN3P26045 RNY3P14-201ENST00000384309 102 ntBASIC2.09□□□□□ -2.07
PTPN3P26045 Y_RNA.474-201ENST00000384341 102 ntBASIC2.09□□□□□ -2.07
PTPN3P26045 RNA5SP465-201ENST00000391195 109 ntBASIC2.09□□□□□ -2.07
PTPN3P26045 AC096638.1-201ENST00000444678 216 ntBASIC2.09□□□□□ -2.07
PTPN3P26045 Y_RNA.635-201ENST00000459041 101 ntBASIC2.09□□□□□ -2.07
PTPN3P26045 RNA5SP233-201ENST00000459153 113 ntBASIC2.09□□□□□ -2.07
PTPN3P26045 AC087477.1-201ENST00000465747 340 ntBASIC2.09□□□□□ -2.07
PTPN3P26045 ANXA2P1-201ENST00000505539 926 ntBASIC2.09□□□□□ -2.07
PTPN3P26045 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.09□□□□□ -2.07
PTPN3P26045 Y_RNA.708-201ENST00000516950 96 ntBASIC2.09□□□□□ -2.07
PTPN3P26045 AC105029.1-201ENST00000520250 669 ntBASIC2.09□□□□□ -2.07
PTPN3P26045 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.09□□□□□ -2.07
PTPN3P26045 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms