Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.2□□□□□ -1.74
RFX1P22670 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.2□□□□□ -1.74
RFX1P22670 MIR4308-201ENST00000580634 81 ntBASIC4.2□□□□□ -1.74
RFX1P22670 AC091167.4-201ENST00000605079 184 ntBASIC4.2□□□□□ -1.74
RFX1P22670 U3.45-201ENST00000607547 219 ntBASIC4.2□□□□□ -1.74
RFX1P22670 AL008718.3-201ENST00000610217 321 ntBASIC4.2□□□□□ -1.74
RFX1P22670 AL078604.3-201ENST00000615580 211 ntBASIC4.2□□□□□ -1.74
RFX1P22670 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.2□□□□□ -1.74
RFX1P22670 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
RFX1P22670 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
RFX1P22670 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.2□□□□□ -1.74
RFX1P22670 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFX1P22670 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.19□□□□□ -1.74
RFX1P22670 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RFX1P22670 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFX1P22670 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFX1P22670 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
RFX1P22670 RNU6-653P-201ENST00000363074 106 ntBASIC4.19□□□□□ -1.74
RFX1P22670 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RFX1P22670 SNORA40.19-201ENST00000390846 128 ntBASIC4.19□□□□□ -1.74
RFX1P22670 RNU6-710P-201ENST00000410424 105 ntBASIC4.19□□□□□ -1.74
RFX1P22670 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.19□□□□□ -1.74
RFX1P22670 AC009127.3-201ENST00000570531 403 ntBASIC4.19□□□□□ -1.74
RFX1P22670 MIR5692C2-201ENST00000577959 77 ntBASIC4.19□□□□□ -1.74
RFX1P22670 MIR3133-201ENST00000583157 78 ntBASIC4.19□□□□□ -1.74
RFX1P22670 AC107294.3-201ENST00000609211 526 ntBASIC4.19□□□□□ -1.74
RFX1P22670 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RFX1P22670 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
RFX1P22670 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RFX1P22670 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.19□□□□□ -1.74
RFX1P22670 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RFX1P22670 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RFX1P22670 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.18□□□□□ -1.74
RFX1P22670 Y_RNA.361-201ENST00000365515 120 ntBASIC4.18□□□□□ -1.74
RFX1P22670 SNORA5A-201ENST00000384111 134 ntBASIC4.18□□□□□ -1.74
RFX1P22670 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.18□□□□□ -1.74
RFX1P22670 BTF3P11-201ENST00000426582 477 ntBASIC4.18□□□□□ -1.74
RFX1P22670 Y_RNA.637-201ENST00000459424 114 ntBASIC4.18□□□□□ -1.74
RFX1P22670 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.18□□□□□ -1.74
RFX1P22670 RNA5SP164-201ENST00000516533 110 ntBASIC4.18□□□□□ -1.74
RFX1P22670 AL137849.1-201ENST00000604767 169 ntBASIC4.18□□□□□ -1.74
RFX1P22670 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.18□□□□□ -1.74
RFX1P22670 AC002064.3-201ENST00000623448 346 ntBASIC4.18□□□□□ -1.74
RFX1P22670 MIR7157-201ENST00000635801 60 ntBASIC4.18□□□□□ -1.74
RFX1P22670 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RFX1P22670 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.18□□□□□ -1.74
RFX1P22670 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RFX1P22670 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RFX1P22670 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
RFX1P22670 RNU6-1027P-201ENST00000383998 107 ntBASIC4.17□□□□□ -1.74
RFX1P22670 U1.1-201ENST00000384101 164 ntBASIC4.17□□□□□ -1.74
RFX1P22670 MIR548B-201ENST00000385247 97 ntBASIC4.17□□□□□ -1.74
RFX1P22670 MIR300-201ENST00000401138 83 ntBASIC4.17□□□□□ -1.74
RFX1P22670 MIR1294-201ENST00000408503 142 ntBASIC4.17□□□□□ -1.74
RFX1P22670 U6atac.2-201ENST00000408644 118 ntBASIC4.17□□□□□ -1.74
RFX1P22670 Z92545.1-201ENST00000411782 234 ntBASIC4.17□□□□□ -1.74
RFX1P22670 AL139247.1-201ENST00000422768 325 ntBASIC4.17□□□□□ -1.74
RFX1P22670 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.17□□□□□ -1.74
RFX1P22670 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.17□□□□□ -1.74
RFX1P22670 RNU1-95P-201ENST00000516357 160 ntBASIC4.17□□□□□ -1.74
RFX1P22670 RNU1-128P-201ENST00000516704 160 ntBASIC4.17□□□□□ -1.74
RFX1P22670 Y_RNA.703-201ENST00000516846 111 ntBASIC4.17□□□□□ -1.74
RFX1P22670 RN7SKP209-201ENST00000516888 304 ntBASIC4.17□□□□□ -1.74
RFX1P22670 MRPS18CP4-201ENST00000535821 231 ntBASIC4.17□□□□□ -1.74
RFX1P22670 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.17□□□□□ -1.74
RFX1P22670 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.17□□□□□ -1.74
RFX1P22670 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.17□□□□□ -1.74
RFX1P22670 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RFX1P22670 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
RFX1P22670 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFX1P22670 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.16□□□□□ -1.74
RFX1P22670 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFX1P22670 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.16□□□□□ -1.74
RFX1P22670 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.16□□□□□ -1.74
RFX1P22670 SNORD114-7-201ENST00000362520 77 ntBASIC4.16□□□□□ -1.74
RFX1P22670 CD24P4-201ENST00000382840 243 ntBASIC4.16□□□□□ -1.74
RFX1P22670 Y_RNA.506-201ENST00000384494 102 ntBASIC4.16□□□□□ -1.74
RFX1P22670 RNU6-125P-201ENST00000384505 107 ntBASIC4.16□□□□□ -1.74
RFX1P22670 RNU1-101P-201ENST00000391171 127 ntBASIC4.16□□□□□ -1.74
RFX1P22670 AL031003.1-201ENST00000404229 172 ntBASIC4.16□□□□□ -1.74
RFX1P22670 TBCAP1-201ENST00000436520 327 ntBASIC4.16□□□□□ -1.74
RFX1P22670 AC140059.1-201ENST00000489238 361 ntBASIC4.16□□□□□ -1.74
RFX1P22670 RNU5F-4P-201ENST00000516581 114 ntBASIC4.16□□□□□ -1.74
RFX1P22670 RNU6-1098P-201ENST00000516772 96 ntBASIC4.16□□□□□ -1.74
RFX1P22670 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.16□□□□□ -1.74
RFX1P22670 AC018630.3-201ENST00000542637 96 ntBASIC4.16□□□□□ -1.74
RFX1P22670 MIR3200-201ENST00000580767 85 ntBASIC4.16□□□□□ -1.74
RFX1P22670 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.16□□□□□ -1.74
RFX1P22670 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.16□□□□□ -1.74
RFX1P22670 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFX1P22670 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.16□□□□□ -1.74
RFX1P22670 Z82209.1-201ENST00000422141 2135 ntBASIC4.16□□□□□ -1.74
RFX1P22670 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
RFX1P22670 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
RFX1P22670 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
RFX1P22670 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RFX1P22670 SNORA51.4-201ENST00000364993 124 ntBASIC4.15□□□□□ -1.75
RFX1P22670 AC126124.2-201ENST00000413542 321 ntBASIC4.15□□□□□ -1.75
RFX1P22670 RN7SL93P-201ENST00000463035 293 ntBASIC4.15□□□□□ -1.75
RFX1P22670 AC083906.5-201ENST00000503722 328 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms